| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1437 |
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| Symbol | |
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| ID | 6121300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1498654 |
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| End bp | 1501530 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649434 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001775990 |
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| Protein GI | 170730557 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA AGCCCGATAT ACCGCATCGC TTGCTCGTCG TATCGCTCGC TATTGCGATC
GCTACGTTCG CCCCCCCCAG CATCGTGTTC GCCCAAGAAA AGGATACAAG TGCTGCTGCC
GTACTGGATG CGGTCAATGT GACCGGCACT CGACTGAAAA GCCAATCGAT GACCGCTTCA
AGTCCAGTAG CCGAGATTAA TGCTGAAGAA TTCCAGTACA GCGGAGCAAC CAAGGTTGAA
GATTTGGTCA ACCAATATCC GCAGTTGTCT TTAAATTTCG ATGGCTTTAC CAACAATGGC
TCGGATGGTT ACGCCACCGT CGATCTGCGC GGCCTTGGGG CTAAGCGCAC CCTGACTCTC
GTCAATGGCA GACGCATTCC TAAGGGCATT ATAGAGACCC CAGACATCAC CATTATCCCC
ACAGCCATTG TTAAACGTGT CGATTTACTT ACGGGCGGCG CATCCGCAGT GTACGGTTCA
GATGCGATTG CTGGCGTGGT TAACTTTGTC CTTGATGACG CGTTTCATGG CATCAGTGTC
AACGCCGGTT ACTCGGCGTA TCAGCACAAC AATGACAACA CCTACATGCG TGGCTTGATG
GACAAAGCCG GCTACCCTTA TCCCAAAGGG GGATCTGGCT TTGACGGTGT TTCCCGAAAT
ATCGACTTGG CAATCGGTGG CAATTTCGGA GAAAGCGGCC ACGCCACGAC TTGGGTCACT
TGGCGCCAGA ACGATGGGCT ATTACAGGGG CAGCGTGACT ATTCTTCGTG TGCACTCAAG
CCCAATGGTA CCGGCTGTGG CGGCTCGCTC ACCGCTAACC CACCTAATTT CAACATCGTG
GCACCAACGG CCGGCACGTT TTTCGTGCTT CCTTCAGCCA ATGGGACGTG GTCCAAAACG
GACACCCCCA ACCTGTACAA CTATGCACCG GTCAATTACT ACCAACGTCC AGATACCCGC
TACACCGCTG GTACTAACAT CCAGTATGAA ATCAATAGCC ATTTCAAACC GTATGTTGAA
GCGTTGTTTG TTAATCACCG CAGCTCAACA CAAATAGCCC CCTCAGGTAC ATTTTTTAAT
GAATTAAAAG TGAATTGCAG TACCGCCGTC ATCGGTAGCC TGTGCAACGA TGTGGGCATT
ACTGACAGCG CATTTAGTGT CTATGTTGCC AAGCGCAACA TTGAAGGTGG ACCACGCAGC
ACCAACACCG ACACGAGTAG TGGCAGCATC ACCGCCGGCA CTGGTGGCAA CCTCATCGGT
AACTGGTCCT ACGACGCTTC ATTCACCTAC AACCGCAGTG CTACAAAGTC AGAAAGTTTC
AATGACTTTA TAACCACACG GGTACACGAC GCGTTATTGG GCTGCCCAAC TGGGTCGTTC
GACGGCTGCG TTCCTTACAA CGTGTGGACA AACAACATCA GTGCAGCCGC TGCGCAATCA
CTACAGGGCG TGGGTATTGT CAATTACACC ACCTCAATGA AAGTGTTCAA CGCCTACGTT
ACTGGTGACT TCGGCTATGC GCTGCCCTGG GCAAACAACA AGCCAATCAA TTTAGTCGCC
GGCTACGAGT GGCGCACCGA AGGCTACACC CGTACTGCCG ACAGCAATAC ACAGGCTGGC
AATTTTGCTG GATCAGGCGG CCCTACCTCC AACGTAGATA ATAGTATTAG CGTCAAAGAG
CTTTTCCTGG AGAGCGCAGT CCCGTTGCTT GCCAATACTG GCATTCTGAA AGAGCTTGAT
TTGCAGTTCG GGTATCGCCG TTCTAAGTAC GATGTTTCCG GGAGCACCAA CACTTATAAA
GCAGGTTTTG GTGCCAGTTT CGCTGAGGGC CAGTACTTAC TGCGCGGTGG CTGGAACCGT
GCAATCCGCG CACCAAGCAT CACCGAGCTG TATGAACCCA ATACGATTGC ACTCTGGGAT
GGTAGCGATC CTTGTGCAGG GACCTCTCCA ACGTTCACTC AGGCACAGTG TGCTAACACT
GGCGTGACTG CTGCTCGATA CGGAAACATC ACTGCAAACC CAAGCGGTCA GTACAACGAG
ATCAGTGGTG GTAACAAAAA CCTCAAGCCG GAAATCGCTG ATACCTGGAC CCTTGGATTC
GCCGCTACAC CGATCAAAAA CCTTGATCTG AGCGCCGATT ATTACAGCAT CAAAATAAAG
GATACGATCC GCACGATCGG TGCATCAAAT ATCCTAGCGG CCTGCGCTCT GACAAACGAT
GCCAATCTGT GCAGCCGCAT CCGCCGTAAT AGCGCCACTG GGGACTTGTT CCTCGGAAGC
GATCCAGCTA CCTCCGGCCT GGTATTGAAC TCGCGGGGCA ACTTCGGTGC ATTGCAGTTC
CGTGGTATCG ACTTAACAGC TTCATATGCC TGGAACGTCG GCCCAGGGCG GTTGACCACC
AACATGATCG GCAACTACGT GATCAAGCAG GACTATCAAC CCGTCCCCGG TATCAGTGAC
AACAATTACA GTTGCGCTGG CATTGTCAAT ACCGCTTGCG GCGATACTGA CGGTCGTAAA
GGAGGAACCT CCAAATGGCG TCATATGGTG AATGTGCGCT ACGGTTTTGA CCGCTACACG
ATGGGTCTGC GCTGGCGCTA TATTGGAAAG ATGAATTACG AGGACACGGA TGGAACACCA
GGTTCGACCG ATAAATTAGT GGTCAACGGC GGAAATCGAG TTTCAGCCTA CAACTACCTG
GATTTGACCG GGTCAATACA ACTGGATAAT GACATCACCT GGACGATGGG ACTGAACAAT
GTGTTCGACC GTGAACCTCC TCTGGTCGGC AGTTCGTTGA GCTATAACGG CAATGCGCTG
AAGGGCTATG ACCAAGCCGG ACGCTATTTC TTCACCAGCA TAGGGTTGAA GTTCTAA
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| Protein sequence | MKFKPDIPHR LLVVSLAIAI ATFAPPSIVF AQEKDTSAAA VLDAVNVTGT RLKSQSMTAS
SPVAEINAEE FQYSGATKVE DLVNQYPQLS LNFDGFTNNG SDGYATVDLR GLGAKRTLTL
VNGRRIPKGI IETPDITIIP TAIVKRVDLL TGGASAVYGS DAIAGVVNFV LDDAFHGISV
NAGYSAYQHN NDNTYMRGLM DKAGYPYPKG GSGFDGVSRN IDLAIGGNFG ESGHATTWVT
WRQNDGLLQG QRDYSSCALK PNGTGCGGSL TANPPNFNIV APTAGTFFVL PSANGTWSKT
DTPNLYNYAP VNYYQRPDTR YTAGTNIQYE INSHFKPYVE ALFVNHRSST QIAPSGTFFN
ELKVNCSTAV IGSLCNDVGI TDSAFSVYVA KRNIEGGPRS TNTDTSSGSI TAGTGGNLIG
NWSYDASFTY NRSATKSESF NDFITTRVHD ALLGCPTGSF DGCVPYNVWT NNISAAAAQS
LQGVGIVNYT TSMKVFNAYV TGDFGYALPW ANNKPINLVA GYEWRTEGYT RTADSNTQAG
NFAGSGGPTS NVDNSISVKE LFLESAVPLL ANTGILKELD LQFGYRRSKY DVSGSTNTYK
AGFGASFAEG QYLLRGGWNR AIRAPSITEL YEPNTIALWD GSDPCAGTSP TFTQAQCANT
GVTAARYGNI TANPSGQYNE ISGGNKNLKP EIADTWTLGF AATPIKNLDL SADYYSIKIK
DTIRTIGASN ILAACALTND ANLCSRIRRN SATGDLFLGS DPATSGLVLN SRGNFGALQF
RGIDLTASYA WNVGPGRLTT NMIGNYVIKQ DYQPVPGISD NNYSCAGIVN TACGDTDGRK
GGTSKWRHMV NVRYGFDRYT MGLRWRYIGK MNYEDTDGTP GSTDKLVVNG GNRVSAYNYL
DLTGSIQLDN DITWTMGLNN VFDREPPLVG SSLSYNGNAL KGYDQAGRYF FTSIGLKF
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