| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0735 |
|---|
| Symbol | |
|---|
| ID | 6120497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 787859 |
|---|
| End bp | 788401 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641648793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001775358 |
|---|
| Protein GI | 170729925 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA AACAACAGAA CAGTAAATCC GAGAACAAAA CCGAATTGGC ATCTGCCATC
TCAATGCCAG ACGTCAATAT CGGGATCAAG AATAGCGACC GCAAGTCCAT CGCCGAAGGG
CTGTCCCACT ATATGGCGGA CGCTTTCACA CTGTACTTGA AGACCCACAC GTTCCATTGG
AACGTCACCG GACCTATGTT CAACTCGCTA CATAGCATGT TCGAAACGCA ATACACAGAA
CAATGGGCCG CACTGGATGA GATCGCAGAA CGTATCCGTG CCCTCGGCTA TAACGCACTG
GGTTCCTACA AAGACTATCT AGAACTAACC TCAATCAAGG AAGAACCAGG ATTGAACGAC
AACACCGACT GGCGCGAAAT GGTTCGCCAA TTGGTCATCG GTAACGAAGC GGTCTGTCGT
ACCGCACGCA AGGTACTGGA CACCGCTGAA GATGGCAGTG ACGACCCAAC CGCCGATTTA
TTGACCCAAC GCCTGCAAAT CCATGAAAAA TACGCGTGGA TGTTGCGTTC GCTATTGCAA
TAA
|
|---|
| Protein sequence | MSKKQQNSKS ENKTELASAI SMPDVNIGIK NSDRKSIAEG LSHYMADAFT LYLKTHTFHW
NVTGPMFNSL HSMFETQYTE QWAALDEIAE RIRALGYNAL GSYKDYLELT SIKEEPGLND
NTDWREMVRQ LVIGNEAVCR TARKVLDTAE DGSDDPTADL LTQRLQIHEK YAWMLRSLLQ
|
|---|
| |