Gene Xfasm12_0108 details

Gene Information

• Locus tag: Xfasm12_0108
• ID: 6119819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 127054
• End bp: 128874
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641648193
• Product: copper resistance protein A precursor
• Protein accession: YP_001774777
• Protein GI: 170729344
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2132] Putative multicopper oxidases
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01480] copper-resistance protein, CopA family

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACTG TTACCTTCCC TTCCCAGGGA GGCATTGACC GGCGTCGCTT CCTAAAAGGC 
TTGGCGTTGG GAGGTGTCGT CGCCGGTACC GGCTTATGGC GTCTTCCTGT CCATGCAGCC 
AACCCTGAGT TGCCGCTACT GCAGCGGCAT ACCACTCCCC TAGAGCTGCG TATCGGCCAG 
TCCAGCGTTA ATTTCACCGG ACGTATGCGT CCAGCCATCA CCGTTAATAA CAGCCTGCCT 
GGACCCGTAT TGCGTTGGCG CCAAGGCGAT ACGGTCCAAA TACATGTCAC CAATACCTTG 
CCCGATGTGA TGACCTCAAT TCATTGGCAC GGCATCGTTC TGCCCTCCAA CATGGATGGC 
GTACCGGGCA TGAGTTTCGA CGGCATTGCA CCAGGCGAAC ACTATCTATA CCGCTTTCAG 
TTACACCAGT CTGGGACCTA CTGGTACCAC AGCCACGCCA TGTTTCAAGA ACAGGCCGGC 
CTGTATGGAG CGTTGATTAT TGATCCACTG GAGCCGCCCC CCTACCGCGC CGACCGCGAG 
CACATCCTCC TATTCTCAGA TTGGACGGAC CTGGACCCTG CCGCACTGTT TCGTAGGCTC 
AAAAAAATGT CCTCTTACGA CAACACCTAC CAACGCACCG TCCGCGATTT CTTCCATGAC 
ATACGCCGTG ATGGCCTGCG CACCACACTG GCCGATCGCC GCATGTGGGG CAGAATGCGG 
ATGACCCCGA CAGACCTGTC CGATGTCAAT GCCCATACCT ATACCTACCT GCTGAACGGC 
ACCACGCCAG CCGGCGACTG GACTGGATTG TTCCGCCCTG GAGAAAAAGT GCTATTACGG 
CTGATTAATG GTTCGGCGAT GACCTATTTT GACGTCCGTA TTCCAGGCCT GAAACTGACC 
GTTGTCGCCG TGGATGGCCA ATACGTCCAT CCGGTGACCG TGGATGAATT ACGTATTGCC 
CTCGCCGAAA CCTATGATGT GCTGATCCAA CCCCACGGCC AGGATGCCTT TGCAATCTTT 
GCCCAGGACA TGGGCCGCAC CGGCTACGCC TGCGGCACCC TCGCCGTGCG TCCCGGCTTA 
CACGCCCCCC TGCCGGCATT GGACCCGCGT CCTCGCCTGA CAATGCAGGA CATGGGACAC 
AGGATGACGC ATGGTCAGCA TGAGAGTCGC GCCTCTGAAA TGGCGGACAT GCCAGGAATG 
ACCCATCCTG GCAGACTGGG CGATCATGCC AGCCACGCCA ACCAGCCTCC TGCGCAGACC 
CCTCATGGTT CACATAGCCT TCCGGCGGAC AGAACAGCGC CGCGGCATCC TGCCAGCGAA 
CAGAACAATC CCTTGGTGGA CATGCATGTG GACGCACCAC AGCCGCGTTT GAATGATCCC 
GGCATTGGCT TGCGTGACAA TGGCCGCCAC GTCTTGACGT ACGCTGATCT GCATAGCCTG 
TTCGATGATC CGGATGGACG TGAACCAGGG CGTGAGATCG AATTACATCT CACCGGCCAT 
ATGGAGAAAT TCGCCTGGTC GTTTGATGGC ATCCCATTTG CCTCCGCGCA ACCCTTACGA 
CTCAACTACG GTGAACGTGT ACGCATCGTC TTGGTGAATG ACACCATGAT GGCGCACCCC 
ATTCACCTGC ACGGCTTATG GAGTGACTTA GAGGATGCCA ACGCCGCGTT TCAGGTCCGT 
AAACACACCA TCGATATGCC TCCGGGTACA CGCCGCAGCT ACCGTGTGCG TGCCGATGCA 
CTGGGGCGCT GGGCCTACCA CTGCCACATG CTGTACCACA TGGAAAGCGG CATGATGCGT 
GAAGTACAGG TGCGCCCATG A 

 

Protein sequence

MNTVTFPSQG GIDRRRFLKG LALGGVVAGT GLWRLPVHAA NPELPLLQRH TTPLELRIGQ 
SSVNFTGRMR PAITVNNSLP GPVLRWRQGD TVQIHVTNTL PDVMTSIHWH GIVLPSNMDG 
VPGMSFDGIA PGEHYLYRFQ LHQSGTYWYH SHAMFQEQAG LYGALIIDPL EPPPYRADRE 
HILLFSDWTD LDPAALFRRL KKMSSYDNTY QRTVRDFFHD IRRDGLRTTL ADRRMWGRMR 
MTPTDLSDVN AHTYTYLLNG TTPAGDWTGL FRPGEKVLLR LINGSAMTYF DVRIPGLKLT 
VVAVDGQYVH PVTVDELRIA LAETYDVLIQ PHGQDAFAIF AQDMGRTGYA CGTLAVRPGL 
HAPLPALDPR PRLTMQDMGH RMTHGQHESR ASEMADMPGM THPGRLGDHA SHANQPPAQT 
PHGSHSLPAD RTAPRHPASE QNNPLVDMHV DAPQPRLNDP GIGLRDNGRH VLTYADLHSL 
FDDPDGREPG REIELHLTGH MEKFAWSFDG IPFASAQPLR LNYGERVRIV LVNDTMMAHP 
IHLHGLWSDL EDANAAFQVR KHTIDMPPGT RRSYRVRADA LGRWAYHCHM LYHMESGMMR 
EVQVRP