Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1677 |
Symbol | |
ID | 6202824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1854201 |
End bp | 1857326 |
Gene Length | 3126 bp |
Protein Length | 1041 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641703189 |
Product | TonB-dependent receptor |
Protein accession | YP_001830358 |
Protein GI | 182682198 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACAT TCAGTAGATA CACGCCAGCG TTGAATCATT TAGCGCTGGC GCTAGCGTCA ACATTGCTCC TGATCGCGAC CTATACAGCC AACGCAACGG CAGCCGAATC CGAGCACAGC ACGAACGAAG ACAGCAAGGC TGCACCCCAC GAGAGCAAAA CCACCGAACT AGACCGCGTT GTGATTACCG GATCACGCAT CCCACGCGCC GGCTTCGACA CGTTAGAACC GGCCACGGTC GTCAACCGAC AATACATTGA CAGTTTCGGC TTCACCAATG TTGCCGATGC ACTATTTTCA CAACCTGGCT TCGACAGCAG CGCCAGTGTA CGCGGCAATC AGGCAAGTTT TGGTGCCGGT GTCAGCTTCC TCGGCCGCTT CGGGCTTGGT TCCAACCGTC AGCTCACCCT GGTCAACGGA CGCCGTTTAG TCACCTCTAA TCCCCCCACC GTCTTTGGCC CTGGCGACGG TGGTACCCAG GTCGATCTGA ATGTGATCCC GACCTCATTG ATCGAACGCA CTGAAACCAT CGGCGTCGGT GGCGCACCCA CGTATGGCTC AGATGCCATC TCCGGGGTCA CCAACATCAT TCTGAAGAAA AACTACGAAG GCGCAGAAGT CAACATTGGC TATGGACTGA CCGAACGCGG CGACAACGCG CGCTACAGCT ACTCAGCACT GCTAGGCAGC AACTTTGCCA ATAGCCGGGG CAACGTGACC ATTGCTCTGG ACGCGGACGA TAGCGCAGGC GTACTCGGTG AGGCACGCCG CTACTACCGC AACGGCTACT CAATGCAAAC CAATCCAAAT GCTGCAGCGA TCGCGCAGTT TCAGCCTGGA CGCCAATACG CGACCGACGG ACGGGTGAAC CCCACTATCC CGTTCAACAC CAGTAACACG GACGGCATCC CTGGCAGAGT GCTCATCCGC AACCGCCGTA TTAACAACAT GACCTGGGGC GGTCTGCTTT ACCCAAGCAC CGGCCGTTAC ATCCGTGACG CCAGCCAACA ACCACGCGGT TTTGGCCCAA ATCAAGATCA ATTCCTGCAA TTCGACAAAC ACGGCAACCT GGTCTCCTAC AACCCTGGGG TTAATTTCGG CAATAGCTCC TCCTCTGGCG GCGATGGGCT GGACTTCAAT CAAACAACAC AAGTCACCTC ACAGTTGGAC CGCAAATCGG TGTTCATGCT CGGCAACTAC GACGTCACCG ATAACATCAG CAGCTTCTTT GAGGGGTCCT ACTACACCTC AAAAGCACTC GAGTTGACCG ATCAGAGCAT TTACAACGCA GCCGGTTTCG GAACCGGCAA TGTCAACGGT AGCGGGGATC AAAGCGGAGC GCTGAACTTT AACATCGACA ATCCGTTTCT CTCCGAGCAA AACCGGCAAG CCCTGCGCAA CCTAGGGATC ACCGATTTCC GACTGTCCCG CGCCTCACGC GATCTGGTCA TCGGCAACTC CAGCACCGAT ACCCGGCTAT GGCGTGCCGT CGCTGGCCTT AACGGCCACT TCGATGCAGG CGGACACCCA TTCACCTGGG AAACCAGCCT CAATCATGGC GAAGGCAACT TCGACTATTA CAGAACCGGT CTGATCCAAC AGCACTTCAT CAACGCCATC AACGTAACGC GTAACAGTGC TGGCGAGATT GTTTGCGATT CGAGTGCAGC AGGGACCACC GTGGACCCGA ACTGCGTGCC ACTCAACCTC TTTGGCGAGG GCGTCGCCTC AGCGGCGGCG CGTAATTACG TCACGACACC CACACATGCC AAAGCACAGA TGAAGCAAAC CGTATTCAAT GCCAACCTGT CCGGCAGTTT CATCGACTTA CCGGGTGGCA AACTCGGCTT CAACGTTGGC TACGAACGCC GTAGGGAAGA AGGCCGCTTC ACCCCAGACG AGTATCAGCG TCTGGGTTTG GGCCGGACGG TACCGACCAC CGGCTCACAC GGGACATTCA CCACGAATGA GTACTTCGGC GAGATCCTGG CGCCGCTAGT CAATCCGGAC GCTCATCTCC CCGGCCTGCA TCGCCTTGAT CTAACCGCCA AACTCCGCCG CGTCAACAAC ACCGTCAACG GGTGGTTCAC GGCCTACACC TACGGCCTCC AATACGAACC GTTCCAAGGC CTCCAACTCC GCGGGAATAA GACCCGCTCC TTCCGCGCGC CCGCCATTGT TGAGTTGTAC ACCAGCCAAC AACCCAGCTA CTACTCCATC CCCGAGCCTT GCACCCCAGC CAATATCACT GCAGGGAATC GCCCGGAACT GCGTCAGCGC AACTGTGAAG CGTTCTTCGC ATACTACAAC GGTGTGAATC CTGGCACTTT CCAGGAGGCC CCAACCACTC AGCTTGGTTC CGTGAGCGGC AATCCCACAC TGGAAAACGA ACTCGCCAAA TCTTGGACAG CCGGGATCGT CTTCCAACCA GAGTGGGCAC ACGGCTTGCG CGTGGCGGCA GACTGGTACG ACATCAAGAT CAGCAATGTG ATCACCCAGT TAGATTCCGG AGATATCACT TCAGGGTGCT TTGACAACGA AACATTCAAC CGCAACGACG TACCAAACGC CAACCGCTTC TGCAGCATGA TCACCCGTGA TCCAAGCACC GGCGTGGCCA GCAGTGTCCG GGGAGAATAT ACCAATGGCC CGTACATCAA CTTCCGTGGC TGGACCGCAG AGATCAACTA CCGTTTGGAT CTGAAAGAAC TGCGCTGGGG CGGGAGCGGA ATCTTGGACC TCGGCTTCTA TGGCTATTTC CCGAAGAACC TGAAGTACAC AGCCGCTCAA GATATCCCAG CTGAAGAATC CGTCGGAACC ATCGATAATT CCAAACGTCA ATTCCAATGG AACGCCCGCT ATCTGACCGG CCCCTGGAAT TTTGGCGTCA GCGCAAATTA CAAAAGCGCT GCGCTGTACA GTCTGACCAA TACAGTAGAG ACACGTGACT ACCTGGGCAT CCCAAGCTAC ACCAGTTACG ACGCCAATAT CGGCTACACA TTTGACAAGC ACAGCAGCCT CAACCTGGCA ATCCTGAACG CAACTGACAA GATGGTGGCA TTCCCATACG TATACGACGG GCTGGGACGC CGCTACATGC TGACATTCAA CTACAAATTC CATTAA
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Protein sequence | MKTFSRYTPA LNHLALALAS TLLLIATYTA NATAAESEHS TNEDSKAAPH ESKTTELDRV VITGSRIPRA GFDTLEPATV VNRQYIDSFG FTNVADALFS QPGFDSSASV RGNQASFGAG VSFLGRFGLG SNRQLTLVNG RRLVTSNPPT VFGPGDGGTQ VDLNVIPTSL IERTETIGVG GAPTYGSDAI SGVTNIILKK NYEGAEVNIG YGLTERGDNA RYSYSALLGS NFANSRGNVT IALDADDSAG VLGEARRYYR NGYSMQTNPN AAAIAQFQPG RQYATDGRVN PTIPFNTSNT DGIPGRVLIR NRRINNMTWG GLLYPSTGRY IRDASQQPRG FGPNQDQFLQ FDKHGNLVSY NPGVNFGNSS SSGGDGLDFN QTTQVTSQLD RKSVFMLGNY DVTDNISSFF EGSYYTSKAL ELTDQSIYNA AGFGTGNVNG SGDQSGALNF NIDNPFLSEQ NRQALRNLGI TDFRLSRASR DLVIGNSSTD TRLWRAVAGL NGHFDAGGHP FTWETSLNHG EGNFDYYRTG LIQQHFINAI NVTRNSAGEI VCDSSAAGTT VDPNCVPLNL FGEGVASAAA RNYVTTPTHA KAQMKQTVFN ANLSGSFIDL PGGKLGFNVG YERRREEGRF TPDEYQRLGL GRTVPTTGSH GTFTTNEYFG EILAPLVNPD AHLPGLHRLD LTAKLRRVNN TVNGWFTAYT YGLQYEPFQG LQLRGNKTRS FRAPAIVELY TSQQPSYYSI PEPCTPANIT AGNRPELRQR NCEAFFAYYN GVNPGTFQEA PTTQLGSVSG NPTLENELAK SWTAGIVFQP EWAHGLRVAA DWYDIKISNV ITQLDSGDIT SGCFDNETFN RNDVPNANRF CSMITRDPST GVASSVRGEY TNGPYINFRG WTAEINYRLD LKELRWGGSG ILDLGFYGYF PKNLKYTAAQ DIPAEESVGT IDNSKRQFQW NARYLTGPWN FGVSANYKSA ALYSLTNTVE TRDYLGIPSY TSYDANIGYT FDKHSSLNLA ILNATDKMVA FPYVYDGLGR RYMLTFNYKF H
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