| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2134 |
|---|
| Symbol | |
|---|
| ID | 8649666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2295591 |
|---|
| End bp | 2296775 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003326710 |
|---|
| Protein GI | 269956921 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGCT CCTCGACCCA CGCCGATCGC ACCCTCGAGC ACCGCGCCGC GACGGTCCAG
CGGGTCCGCG AGGGCGCCGG CACCCTCACC AACGCCGCCC TGCGCCGGCT CGACGACGAG
CTCCCGTGGT ACCGCGACCT GCCCGCCGAG GACCGCAGCT ATGTGGGCAT GGTCGCCCAG
TCCGGCATCC GGTCGTTCGT CACCTGGTTC GCGGACCCGT CGGCACCGCC CAGCGGCGTC
GGCGAGATGT TCTCCGCCGC GCCGCGCGAG CTGACGCAGT CGATCTCGTT GCAGCACACG
CTGCAGCTCG TGCGCCTGAT GGTCGACGTC GTCGAGTCGC ACGCGGCCGA GATCGCCGCC
CCGGGCGCGG AGCGCGAGGT GCGCGAGGCC GTGCTGCGCT ACTCGCGCGA GGTCGCGTTC
TCGGCAGCCG AGGTGTACGC CCGCGCCGCA GAGATGCGCG GCGCGTGGGA CGCGCGCCTG
GAGGCGCTGG TGGTCGACGC GCTGGTGCGC GGCGACGGCG ACGACGCGGT CCGTTCACGC
GTGTCCGCGC TCGGCTGGTC CGGCCGCGGC CGCACGCTGG TGATCGTCGG CACGACGACG
ACGGCGCTGG ACGAGCTGCG GACCGCCGAC CTGCGGCGGG CCGCGCGGCG GGCCGCCGGG
GACGCGCTCG TGGGGATCCA CGGCGACCGG GTGGTGCTCG TGCTCGGTGG CGAGGGAGAC
CTCATGGCCG CCGCAACCAG CCTGCTCTCC AAGTTCGGGC CCGGGCCCGT CGTCATCGGC
GGGCTCGTCC CGTCCGTCGC GGAAGCGTCG CGCTCGGCGG CGGCTGCCCT GGCCGGGCTC
GCCGCGGCAC CCGCGTGGCC GCAGGCACCG CGCCCCGTGA TGGCCGACGA CCTGCTGCCC
GAGCGGGTGC TCATCGGCGA CGCCGCCGCG CGCACCACCC TGGTGGAGCA GGCGTACCGC
CCGCTGGCCG GCGCCGGCGG TGCCGTGCTG GAGACGCTCA CGGCGTATCT GGGCACCGGC
CGCTCGCTCG AGGCGGCGGC CCGGCAGCTC TACGTGCACC CCAACACGGT GCGCTACCGG
CTGCGCAAGG TTTCGGAGAT CACCGGGTGG AACCCGCTGG ACGCCCGAGA GTCGTTCGTC
CTCCAGGTCG CGATGGCGCT CGGGCAGCTC ACCACGGGCG CCTGA
|
|---|
| Protein sequence | MTRSSTHADR TLEHRAATVQ RVREGAGTLT NAALRRLDDE LPWYRDLPAE DRSYVGMVAQ
SGIRSFVTWF ADPSAPPSGV GEMFSAAPRE LTQSISLQHT LQLVRLMVDV VESHAAEIAA
PGAEREVREA VLRYSREVAF SAAEVYARAA EMRGAWDARL EALVVDALVR GDGDDAVRSR
VSALGWSGRG RTLVIVGTTT TALDELRTAD LRRAARRAAG DALVGIHGDR VVLVLGGEGD
LMAAATSLLS KFGPGPVVIG GLVPSVAEAS RSAAAALAGL AAAPAWPQAP RPVMADDLLP
ERVLIGDAAA RTTLVEQAYR PLAGAGGAVL ETLTAYLGTG RSLEAAARQL YVHPNTVRYR
LRKVSEITGW NPLDARESFV LQVAMALGQL TTGA
|
|---|
| |