Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1137 |
Symbol | |
ID | 8648655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1224901 |
End bp | 1226949 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Amylo-alpha-16-glucosidase |
Protein accession | YP_003325726 |
Protein GI | 269955937 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.159404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCG CGACCACGCC GCTGCAGCCC TTGCTCCACG CCCTGCTGGT CACGCTGCGG GCGCCCAGCC AGGTGTGGTG CTCCCCCGAC GGGCAGGTCC ACGCGCACGG GCTGCACGGC GTCTACCACG CCGACGTGCG CGTGCTCTCG CAGGCGGAGG TCCGCGTCGA CGGGGAGCTG CCCGAGGCCA TCGCGGCGGG CGGCACCGGC CCTGGCACCT TCGAGGCGTC CGTGGTGCTG CGCGGCATCG ACGGCCCCGG CGCGGACCCG ACGACGCTGC TGCGGCGGCG CCGCACCGTC ACACCGGGCG AGGTCACCGA GGAGCTGGAG GTCTCCTCCG GCACCGACGT GCCGGTGTCC GGCCGCGTGT CCGTGCACCT CGCCTCCGAC CTCGCCCGCA CCGAGACGGT CAAGCAGGGC CTGCCGACGG CGCCGGTCGC ACCCGAGGTC ACCAGCGACG GCGTGCGCTG GTCCGACGAC GGCACCGTCG TCGACGTGAC CGCCCCGGGC GCCGAGATCC ACGCCGACCA CGCGGGCGCC ACCCTGATGT GGGACGTGCG GGTCACGCCC GGGCAGCCGG TGACCGTGGG CTGGTCGGTG CGCTCGGAGG TCACCGCCGT CGTGCACGCC CCCGCCACGC CCGCCCCGGA GTGGTCGGTG CCGCAGGTCG AGGCGGACGA CCGGCGCCTG CCCGCCCTGG TGACCCGTTC GCTCGCGGAT CTCGACGGGC TGCGCATGAG CGCCGGGTTC GCCCCGGACG AGACGTTCCT GGCCGCGGGC GCCCCCTGGT TCTTCACGCT GTTCGGCCGG GACTCGATCT GGGCGGCCCG CCTGCTGCTG CCGCTGGGCA CGGACCTGGC CCGGGGCACC CTGCGCACGC TCGCCGCACG CCAGGGCACC CGGACCGACC CGGCGACGTC GGAGCAGCCC GGCAAGATCC TGCACGAGGT GCGTTCCCAG GAGCTCAAGG GCGAGGGCGG CATGAGCCTG CCGCCCCTGT ACTACGGCAC GGTGGACGCC ACCAGCCTGT GGGTGTGCCT GCTGCACGAC GCCTGGCGGT GGGGCATGGC CCGCGACGAC GTCGAAGGGC TGCTGCCGGC GCTCGACGCG GCGCTGGGCT GGATGCGCGA CCACGGTGAC GCCGACGGCG ACGGGTTCCT CGACTACGCC GACACGACCG GGCACGGGCT GTCCAACCAG GGCTGGAAGG ACTCGGGCGA CTCGATCCAG TGGAAGGACG GTCGGCTCGC CGAGGGGCCC ATCGCGTTGT CCGAGGTGCA GGCCTACGCC CACGAGGCCG CCGTCGGCGC GGCCGACCTG CTCGACGCGC TCGGGCGGCC CGGCTCGCAC GAGTGGCGGG ACTGGGCGGC CGCGCTCAAG GCCCGCTTCC GCGAGAAGTT CTGGCTGCAC GACGGCGACG GCCCGTACGT CGCCATCGCG CTCGACCGGC ACGGCGCCCC CGTCGACTCC GTGGCCTCCA ACATGGGCCA CCTGCTCGGC ACGGGCCTGC TCGACCCGGA CGAGGAGCGG GCCGTCGCGC ACCGACTCGT CTCCGACGAC ATGTCCTCCG GGTACGGGCT GCGCACCCTC TCGACGACGT CGCGCGGGTA CTGGCCCCTC GGGTACCACC GCGGGACGGT GTGGACCCAC GACACCGCCA TCGCCGTCGT CGGGCTGGCG AAGGCCGGGC TGGGAGCCGA GGCGGGGGTG CTCGCGCGCG GGCTGCTCGA GGCCGCGCCG CACTTCGCGT TCCAGCTCCC GGAGCTGTAC GGCGGGAACG AGGTGGGCGA CGGGCCGGGG CCGCTGCCCT ACCCGGCGGC GTGCCACCCG CAGGCGTGGT CGGCGGCATC GGCGGTCGCG ATCCTCACCG CGGCCCTCGG CCTGGACCCG GCCCCGGACG GCGGGCTGCG CGCGACGCCG CCCACGCCGT CGGCGGTCGG CGCGCTCGAC GTCGACGGGC TGCGGGTGGG TGGGCGATCC TTCCGCGTGC GAGCGTCGGC CGACGGCGCG GCGCGGGTCG AGCCGGCGCA GGTCGAGGCG GCGGGCTGA
|
Protein sequence | MTAATTPLQP LLHALLVTLR APSQVWCSPD GQVHAHGLHG VYHADVRVLS QAEVRVDGEL PEAIAAGGTG PGTFEASVVL RGIDGPGADP TTLLRRRRTV TPGEVTEELE VSSGTDVPVS GRVSVHLASD LARTETVKQG LPTAPVAPEV TSDGVRWSDD GTVVDVTAPG AEIHADHAGA TLMWDVRVTP GQPVTVGWSV RSEVTAVVHA PATPAPEWSV PQVEADDRRL PALVTRSLAD LDGLRMSAGF APDETFLAAG APWFFTLFGR DSIWAARLLL PLGTDLARGT LRTLAARQGT RTDPATSEQP GKILHEVRSQ ELKGEGGMSL PPLYYGTVDA TSLWVCLLHD AWRWGMARDD VEGLLPALDA ALGWMRDHGD ADGDGFLDYA DTTGHGLSNQ GWKDSGDSIQ WKDGRLAEGP IALSEVQAYA HEAAVGAADL LDALGRPGSH EWRDWAAALK ARFREKFWLH DGDGPYVAIA LDRHGAPVDS VASNMGHLLG TGLLDPDEER AVAHRLVSDD MSSGYGLRTL STTSRGYWPL GYHRGTVWTH DTAIAVVGLA KAGLGAEAGV LARGLLEAAP HFAFQLPELY GGNEVGDGPG PLPYPAACHP QAWSAASAVA ILTAALGLDP APDGGLRATP PTPSAVGALD VDGLRVGGRS FRVRASADGA ARVEPAQVEA AG
|
| |