Gene Xaut_5067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_5067 
Symbol 
ID5420649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp290211 
End bp291551 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID640873721 
Productfumarate lyase 
Protein accessionYP_001409501 
Protein GI154243928 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.185188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.273207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT GGTCCTTCGG CTCTCAGATC TACGGCAGCG CTTGGTCGAC GCTGGCGCTC 
CGCGCGCTCT TCGACGACCT GCCGCGCACC CGCCGCTGGC TCGACATACT GGCGACGCTG
GCCGAGGTGC AGGGCGAGTT CGCTGTGATC CCGGCGGAAA ATGCGGCGGC AGTCGCCAAG
GCCTGCCGCG CCGTGGTGTT GGACGAGTCT TTCTTCGCCG ACGTGCGGGC TGGCTATGAG
GCGACCGGGC ATTCGACGGC GGGACTCATT CAGGCTGTGC GCAGGCGATC TCCGGAGGCG
GGCGAGTGGT TTCACTTCGG CGCGACGGTA CAGGATGTCA CCGTCAGCTG GCTGATGCTG
GCGCTTGACG AGGCCCGCGA ACACCTCCTC GTCGATCTCG ATCGGGCGAT CGTGGCCGCG
ACGCGACTCT GCCTCGAGCA CCGCGACACC GTGAAGCCGG GCCGGACCCA TGGCCGGCAG
GGGCTGCCGA TCACCTTCGG TTTCAAGGTT GCCGGATGGC TGGCCGAGAT GCGCCGGCAC
CGCCAGCGCT TCAGCGAGGT GGCGGCGCGG ATGGGCGTCG GACAGCTCTG CGGCGGCGTC
GGCAGCCTGT CGGCGCTCGG CTCGCGCGGC CTCGAAGTGC ACCAGGCGTT TTGCGAACGG
CGCGGGCTTC GCCCGCCGGC GACGTCCTGG ACAATAAGTC GCGACGTGAT CGTCGAATGG
GGGCACCTGC TGGTTCTGGT CGCTGGCACC GCCGATCGGA TCGGCCACGA AATCTACTGC
CTGCAGCGCG ACGAGATCGA CGAGGTGAGA GAAGGGGCGA GCCGCGAGCA GATCGGCAGC
ATCACCATGC CGCACAAGCG CAATCCGGAA CTCTCCGAGC ATCTCGGCCC GCTGTCGCGG
GTGGTCTGCG CCAACGCCGC GGCGCTGGCC GAGAGTCTTC CGCACGCCCA CGAGCGCGAT
GGCCGCGCCT GGAAGGTGGA GTGGCATGCG GTGCTGGAAC TCTCCATGGC GGCGGGCAAG
ACGATGCAGT TGCTGGAGCG CCTCGATGTC GATGGCGAGC GGATGCGAAG CAACCTCGAA
GCTTCCGGCG GCCAGACCGG TTCCGAGGCG GTGATGCTTG CGCTCGCGGC GCAGCTGGGC
AAGCAGACCG CCCATGGACT GGTGCACCGG ATCGCGGGCG AAGCGGCGAA CTGCGGCCGG
CCGTTTTGCA CGGTGTTGGT GGAAGATTCA GCGGTCGCGG CGGTGCTGTC GGCGGCGGAG
ATCGAGCATC CGCTCGACGA CGCGGTGCAG ACGGCTCAGT GCGGCGCGCT GGTCGACGGC
GTGCTGGGGC AGGACAACTG A
 
Protein sequence
MTGWSFGSQI YGSAWSTLAL RALFDDLPRT RRWLDILATL AEVQGEFAVI PAENAAAVAK 
ACRAVVLDES FFADVRAGYE ATGHSTAGLI QAVRRRSPEA GEWFHFGATV QDVTVSWLML
ALDEAREHLL VDLDRAIVAA TRLCLEHRDT VKPGRTHGRQ GLPITFGFKV AGWLAEMRRH
RQRFSEVAAR MGVGQLCGGV GSLSALGSRG LEVHQAFCER RGLRPPATSW TISRDVIVEW
GHLLVLVAGT ADRIGHEIYC LQRDEIDEVR EGASREQIGS ITMPHKRNPE LSEHLGPLSR
VVCANAAALA ESLPHAHERD GRAWKVEWHA VLELSMAAGK TMQLLERLDV DGERMRSNLE
ASGGQTGSEA VMLALAAQLG KQTAHGLVHR IAGEAANCGR PFCTVLVEDS AVAAVLSAAE
IEHPLDDAVQ TAQCGALVDG VLGQDN