| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4723 |
|---|
| Symbol | |
|---|
| ID | 5421483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 5238144 |
|---|
| End bp | 5239913 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640883987 |
|---|
| Product | SH3 type 3 domain-containing protein |
|---|
| Protein accession | YP_001419599 |
|---|
| Protein GI | 154248641 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0494815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTGC TCAGACTGGC TGGCTGGGTC GCTGGCCTGG CGATGGCAGG GATCGTGTCC
GCCCAGGCGG CACCGGCCTT CTCCACTGCG AACGTGAATA TCCGGACGGG TCCGGACACC
GAATTCCCGA GCCTCGGCGT CATTCCCGAA GGCTCGCCGC TCGAAGTCGA GGGCTGTCTC
CAGGATGAAT CCTGGTGCGA CGTCATCTGG CAGGACTATC GCGGCTGGGT TTACAGCGAA
TATCTCGGCT ACGAGCAGCA GGGCCGCACC GCGGTGCTTC CCGACTGGGG CGTGGCTGCT
ATCGGCGTGC CCGTGGTGGC GTTTGCCGCC TCGCAATACT GGAACCAGTA TTACGTGGGC
CGGCCCTACT ACGTGAACCA GCCCTGGTAT GCGGACCGCT ACCGGTGGGA AGGCTATGCG
CCGCGGCCGC GTCCCGGCTG GTATGCCCCG CCTCCGGGGC CGCGCCAGCC CGGCTGGTGG
CGTAACAACT ATATCGCCCC TCCCGGCATG CAGCCGCCCC CGCCCGTTGC TCCGCCGCCG
CCTCCCGGCT GGAACCGTCC CGGTGGACCG GGTGGTCCCG GCTATCCGGG TGGCCCTGGT
TATCCTGGTG GTCCCGGCCG TCCGGGTGAG CCCGGTGGTC CTGGCTATCC GGGTGGTCCT
GGCCGTCCTG GTGAGCCTGG CGGTCCTGGT GGTCCCGGTT ATCCGGGCGG TCCTGGTCGT
CCGGGTGAGC CCGGTGGTCC CGGCCGTCCC GGCGTTCCCG GCCAGCCTGG GGTTCAGCCC
GGCACGCCTC CCGGTCAGCC GGGTGGTCCT GGTGGTCCTG GTGGTCCTGG TCGTCCGGGT
GAGCCCGGCG GTCCCGGCCG TCCCGGCGTT CCCGGCCAGC CTGGAGTTCA GCCCGGCACG
CCTCCCGGTC AGCCCGGTGG TCCGGGTGGT CCTGGTCGTC CGGGTGAGCC CGGCGGTCCC
GGCCGTCCCG GCGTTCCCGG CCAGCCTGGG GTTCAGCCCG GCACGCCTCC GGGTCAGCCG
GGTGGTCCAG GTGGTCCCGG CCGTCCCGGT GTCCCCGGCC AGCCTGGGGT TCAGCCCGGC
ACGCCTCCCG GTCAGCCCGG TGGTCCGGGT GGTCCCGGCC GTCCCGGTGT CCCCGGTCAG
CCTGGGGTTC AGCCCGGCAC ACCTCCCGGT CAGTCCGGCC AGCCCGGTGG TCCCGGCCGT
CCGGTGGTTC CCGGCCAGCC TTCGGGCCAG CCCGGCACGC CTCCCGGTCA GCCCGGCCGT
CCCGGCGGTC CTGGGCCGAA CGGTTTGCCG AACCGCCCGC CGTCGCCGCA GGAACGCCAG
CAGTTGCAGC AGCAACAGCG CCAGCAGATC CAGCAGGAGC AGTTGCAGCA GCGTCAGCAG
CAGCAGATCC AGCAGCGTCA GCAACAGCAG CAGCGCCAGC AGGAACAGAT CCAGCAGCGC
CAGCAACAGC AGCAGCGCCA GCAGGAACAG ATCCAGCAGC GTCAGCAGCA GCAGTTCCAG
CAGCGCCAGC AACAGCAGCA GCGCCAGCAG GAGCAGATCC AGCAGCGTCA GCAACAGCAG
ATCCAGCAGC GCCAGCAGCG TCCGCCGGAG CAGTACCAGC AGCGGCCGCC GCAACAGCAG
CGTCAGGAGC GTCCGCCGCA GCAGTACCAG CAGCAGCGTC CGCCGCAGCA GCAGGGCCAG
CCGCAACGCC AGCCCCAGCC TCAGGGCCAG CCGCAGCGGC CACAGGGACG GCCTGACTGC
CGTGGGCCTG ACTGCCCGCC GCCGCGCTGA
|
|---|
| Protein sequence | MRVLRLAGWV AGLAMAGIVS AQAAPAFSTA NVNIRTGPDT EFPSLGVIPE GSPLEVEGCL
QDESWCDVIW QDYRGWVYSE YLGYEQQGRT AVLPDWGVAA IGVPVVAFAA SQYWNQYYVG
RPYYVNQPWY ADRYRWEGYA PRPRPGWYAP PPGPRQPGWW RNNYIAPPGM QPPPPVAPPP
PPGWNRPGGP GGPGYPGGPG YPGGPGRPGE PGGPGYPGGP GRPGEPGGPG GPGYPGGPGR
PGEPGGPGRP GVPGQPGVQP GTPPGQPGGP GGPGGPGRPG EPGGPGRPGV PGQPGVQPGT
PPGQPGGPGG PGRPGEPGGP GRPGVPGQPG VQPGTPPGQP GGPGGPGRPG VPGQPGVQPG
TPPGQPGGPG GPGRPGVPGQ PGVQPGTPPG QSGQPGGPGR PVVPGQPSGQ PGTPPGQPGR
PGGPGPNGLP NRPPSPQERQ QLQQQQRQQI QQEQLQQRQQ QQIQQRQQQQ QRQQEQIQQR
QQQQQRQQEQ IQQRQQQQFQ QRQQQQQRQQ EQIQQRQQQQ IQQRQQRPPE QYQQRPPQQQ
RQERPPQQYQ QQRPPQQQGQ PQRQPQPQGQ PQRPQGRPDC RGPDCPPPR
|
|---|
| |