| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4502 |
|---|
| Symbol | |
|---|
| ID | 5424843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4991925 |
|---|
| End bp | 4993559 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640883766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001419380 |
|---|
| Protein GI | 154248422 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4383] Mu-like prophage protein gp29 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.221715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCC TGTCCAAGAT CCTCGGCCCC GATGGCCGGC CCGTCGACCT CGACGCCTTG
TTCGACAAGG CGAAGGCCGG CCCGACGCTC ACCGGCGTGC GCTCGCCCAT CTCCGGCCAC
CCTGCGGATG GGCTCACGCC GGCGCGCCTG GCGCGCATCC ACCGGGCCGC CGCCCAGGGC
GACATCCTCG CCTACCTGGA GCTGGCCGAG GATATCGAGG AGCGCGACCT GCACTATGCC
GCCGTGCTCG GCACGCGGAA GCGGCAGGTC TCCCAGATCC CCATCACGGT GGAAACGGCG
AGCGACGATC CCGAGCACAT CAAGCACGCG GATTTCGTCC GCGACTGGCT TGCCGAAGGG
GTGCTCGACG CGGCTCTTTT CGACCTCTGC GACGCCATCG GAAAGGGCTT CTCGGTCCTC
GAAATCGAGT GGGAGACCAC GCCCGAACGT ATCGCACCGA GTTCGCTCAC ATGGCGCGAC
CCGAGGTGGT TTAGCTTCGA TGAACTGAGC CTCGACGAGG TCATGCTGTA CGAGGGCATC
GGCAAGGAGC CGCTGGCCCC GCACAAGTTC ATCACCCACC GGCACAAGTC CAAGAGCGGG
CTCACCATCC GCTCCGGCCT CGCTCGCGTC GCATCGTGGG CGTGGATGTA CAAAGCTTTC
ACGCTGCGCG ATTGGGCGCT CTTCTGTCAG AACTACGGCA TGCCCATCCG CCTCGGCCGC
TACGGCGCCG GCGCCCTCCA CGAGGACAAA GAGGTGCTGT GGTCGGCGGT GGCCAACATC
GCCGGCGACT GTGCCGCCAT CATCCCCGAG AGCATGCGGA TCGAGTTCGT CGAGCTGAAA
AACGCGGCGG ATGGCTCGAA GCTCTATGAG GCGCGCGCGA GCTGGATGGA CGCCCAGATC
TCCAAGCTCG TGCTGGGGCA GACGGCCACC ACGGATGCCA ATCCGGGAAG TCATGCTGCT
GGGCAGACTC ACCGCCTGGT GCAGGAGGAC ATGGAGCGGG CCGACGCCAA GCTCATCGCG
GCGACCCTCA ACCGCCAGCT CATCCACCAG ATGGTGGCCT TCAACTTCGG CCCCCAGCCC
AAGTATCCGG TGCTGCGCAT CGGCCGGCCG GACGAACTAC CCATCGGCGA GATCGTCACC
GCCCTCGAAA AGCTCGGGCC GCTGGGGCTG GAGGTGGAAG AGAGCCAGAT CCTCGACCGT
CTCGGCCTCA CCGAGGCCGC CAAGGCGACC GAGGGCAAGA TCGTGCGCAA GATCGGCGGG
CGGCCGAAGC CGGCGGAGGC AAAGCCGCAG ATCCTGCCCG GCCTGCCGGG TGGCCCGCCG
CTCGATGGCG GCCGCCCGCC GGCGGCTGGC CTCACCCGTC ATCTGGTGTC GCTCCACGCC
TCCGCCCCTG ACCCGGAATA TGTGGATGCG CTCACGGTGC GCCTGGCTGC GGAGATGAGC
GGCGTCATGG CCGGCCTCAC CGGCGAGATC CGCCGCGCCT TCGACGAGGC GAGCGACATG
CGCGACCTGG CCGACCGCCT GGAGCGCATG CAGCTCGACC CGAAAGCATT CGCCGAGGCA
ATGACGCGTG GCATGGCGCT GGCCCACCTG GTGGGGCAGG CCGCCCTGGT GGATGAGCTG
CGCCTCGAGG TCTGA
|
|---|
| Protein sequence | MARLSKILGP DGRPVDLDAL FDKAKAGPTL TGVRSPISGH PADGLTPARL ARIHRAAAQG
DILAYLELAE DIEERDLHYA AVLGTRKRQV SQIPITVETA SDDPEHIKHA DFVRDWLAEG
VLDAALFDLC DAIGKGFSVL EIEWETTPER IAPSSLTWRD PRWFSFDELS LDEVMLYEGI
GKEPLAPHKF ITHRHKSKSG LTIRSGLARV ASWAWMYKAF TLRDWALFCQ NYGMPIRLGR
YGAGALHEDK EVLWSAVANI AGDCAAIIPE SMRIEFVELK NAADGSKLYE ARASWMDAQI
SKLVLGQTAT TDANPGSHAA GQTHRLVQED MERADAKLIA ATLNRQLIHQ MVAFNFGPQP
KYPVLRIGRP DELPIGEIVT ALEKLGPLGL EVEESQILDR LGLTEAAKAT EGKIVRKIGG
RPKPAEAKPQ ILPGLPGGPP LDGGRPPAAG LTRHLVSLHA SAPDPEYVDA LTVRLAAEMS
GVMAGLTGEI RRAFDEASDM RDLADRLERM QLDPKAFAEA MTRGMALAHL VGQAALVDEL
RLEV
|
|---|
| |