| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4029 |
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| Symbol | |
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| ID | 5424722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4457011 |
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| End bp | 4458414 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640883283 |
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| Product | integrase family protein |
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| Protein accession | YP_001418908 |
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| Protein GI | 154247950 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.161912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0270341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAA TCAAGCTCAC CAAGACGGCG GTTGACGCCG CAAACCCGCA GGAACGCGAC
TACGAACTCC GTGATACGAC GATACCCGGC TTTCTTGTAA AGATCACGCC GACCGGCCGG
AAAACTTTCA TGATCGCCTA TGTCGCCAAC AACGGTCAGC GCCGCAAACC GGCGATCGGC
CGCTATGGCG AGATCACCGT CGAGCAGGCG CGCAGGATCG CCCAGGACTG GCTCGCCGAA
GTCCGGCGCG GGGCTGACCC CAGCGCCGAG CGAACGGCAA GCCGCCAGGC CCCGACGGTC
AAGGAACTCT TCGACCGCTT CATCACCGAC TATTCCGAAA GCCGGAACAA GCCTTCGACG
GTCAAATCGA ACCGGGGCTT TGGCAAGCGC CATATCCTTC CCGCGCTCGG ACACATGAAG
GTGCCGGACG TCACCCGCAG CGATATCGCA AACCTGATGA AGAAAATGTC AAAGTCGCCG
GTAAACGCCA ATCGCGTTCT CTCGGCCGTG CGAAAGATGT TCAATATGGC CGAGGTCTGG
GGGATGAGAC CGGACGGCAC CAATCCCTGC CGGCACATTC CGAAATTCCC GGAACGCGGC
AAGACCCGGC TCATCACCGA CGCCGAAATG CGGAAGCTCT TCGAGTATCT CGACCGTGCC
GAAGCTGAAG GGCTGGAGCA CCCTTTCATC ATTCTAGCGA TCCGGCTCCA GTTTGAGTTC
GCCGCACGCA TGTCGGAGAT CATCGAGCTC GAATGGTCCT GGGTTGATTT CGACAATCGC
CGCGTCGTCT GGCCGGACAG TAAGACCGGC GGGATGTCCA AGCCGATGAA CGCCGAGGCG
CTGCGCCTGT TCGAGACCGC GCCGCTGCTG GAGGATTCGC CCTTTGTTTG CCCTTCGGTC
TTCGACCCGA AGAAGGCGAT GTCCCCTTAC ACTTACTATC AGGGCTGGAA GCGCATCCTG
AAGCGCGCCG GGCTCCCTCA CGTCGGCACG CACGGCATCC GTCATCGTTC CGCGACGGAC
ATCGCCAATT CCGGCGTGCC GGTGAAGGTC GGTATGGCAC TCACCGCCCA CAAGACGGTG
ACGATGTTCA TGCGCTACGT TCACACCGAG GACGATCCCG TCCGGGCGGC GGCTGAAGCC
GTCACGCAGC GCCGGATGAA CGTCATTGGT GTCGAGCATC AGCCGCCTGC ACCGCCGCCT
CCCGTCACGG AACTGCCCTC CATCGCCCCC GTGGTGGAGA CCGCTCCTGC GACCCTTGGC
CCGGATGGCA AGCCGCTCGG CTTCGACGAC GGCAAATACA CATCGCGCAC GCGGCTCGGA
AACTACCGTC CCTTCCGTCA CCGCAGCGGC GAGAACCGGG ACGTGCCACC CGGGAGCAAG
CGGGCCGAAG CGCAGGATGT GTGA
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| Protein sequence | MPKIKLTKTA VDAANPQERD YELRDTTIPG FLVKITPTGR KTFMIAYVAN NGQRRKPAIG
RYGEITVEQA RRIAQDWLAE VRRGADPSAE RTASRQAPTV KELFDRFITD YSESRNKPST
VKSNRGFGKR HILPALGHMK VPDVTRSDIA NLMKKMSKSP VNANRVLSAV RKMFNMAEVW
GMRPDGTNPC RHIPKFPERG KTRLITDAEM RKLFEYLDRA EAEGLEHPFI ILAIRLQFEF
AARMSEIIEL EWSWVDFDNR RVVWPDSKTG GMSKPMNAEA LRLFETAPLL EDSPFVCPSV
FDPKKAMSPY TYYQGWKRIL KRAGLPHVGT HGIRHRSATD IANSGVPVKV GMALTAHKTV
TMFMRYVHTE DDPVRAAAEA VTQRRMNVIG VEHQPPAPPP PVTELPSIAP VVETAPATLG
PDGKPLGFDD GKYTSRTRLG NYRPFRHRSG ENRDVPPGSK RAEAQDV
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