| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3828 |
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| Symbol | |
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| ID | 5421018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4247908 |
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| End bp | 4250226 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883084 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001418709 |
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| Protein GI | 154247751 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0450856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTG TTTCGAGCCT GATTTCCGTG AGCGCGCTTG CGCTCGCCCT CGCGTGGAGC
GGGGCGATGC CGGCTCTCGC GGAGACCACG CCGACGGCCA AGCCGGCCTC CGCCAAGGAC
AGCGCGAAGG ACGCCAAGGC CAAGGATTCG AAGGCGAAGG ATACCCATTC CGCCAAGGAC
ACCAAGGCCA AGGACGCCAA GGCCCACGAC AGCAAGGCGA AGGACGCCAA GGCCAAGGAC
ACCAAACCGA CCGGCAATGC CAAGGCATCT GCCGACGCCA AGTCCGGCAA GGACGCCAAG
GCCCACAAGG ATGCGGCAAA GCCGTCCACC TCCAAGCCCT CGGGCAAGCC GGCCACCGCC
CGCGCCCCGG CCGCCACGCC CCAGGTGGCG CCGACGCTGG GCGCCTCGTC CAACATTCCC
GGCGGCGACC TCGCCGCGCT GAAGGTGGCG GTGAACGCCG CCAAGAACGG ACGCGCGGCG
GAAGCCATGG GCGCCGCCCA GCAGCTCGAC GATCCGGCGG CGCGCAGCCT CGTGACCTGG
CTCGTCATCC GCCACGCGCC CAACGACCTC GGCTTCGACG CCATCAACCA GTTCCTGAAG
GACAAGCCCG GCTGGCCGAC CCAGAACACC CTGCGCCGCC GCGCCGAGCG GGTGCTGTTC
CAGGAGAACC GCGACCCGGC CAAGGCGCGC GACTTCTTCG CCGAGCAGCC GCCGCTCTCC
GGCGAGGGCA AGATCGCGCT CGCCCGCTAC CTCGTGGCCG CCGGCAACCG CTCGGATGCG
GCCGACTGGG TGCGAGAGGC GTGGCGCGAG GATGAGCTGA ACGAGAGCTT CGAATCGAAG
ATCATCGACG AGTTCTCCGG CTTCCTCACC CGCACCGACC ACAAGCTGCG GGCCGACCGC
TTCAGCTACA AGCCGGACCC CGACCGCGCC CTGCGCGCCG CCGCCCGCGC CGGCTCGGAC
ATCGTCGCCC TCACCAAGGC GCGCATGGCC ATCGCAAAGA AGGACTCCAA CGGCGAGAAG
CTACTGGCCC AGGTGCCGTT CAATTTGTCG AGCGATCCGG CCTATCTGTT CGCCAAGTCC
CAACTCGCCC GCCGGGCCGA CAAGCCGCAG GACGCCGCGC GCGCGCTCCT GGCCGGCGCC
ACCTCCGACC AGGTGCGGGC CGATCCAGAC GAATGGTGGA TCGAGCGGCG CCTCGTCGCC
CGCGAGCTGC TGGACGCCGG CGATTTCCAG ACCGCCTACA AGGTGGCCGC CACCGGCGTG
CCGCCCAAGG CCGACAATTA CCGTGCCGAG CAGCACTTCA CCGCCGGCTG GATCGCCCTG
CGCTTCCTGA AGGACCCGCG CACCGCCGCC CAGCATTTCG CCAAGATCGA CGACGACCAG
AAGCACCCCA TCACCCTGTC GCGGGCCTAT TACTGGCAGG CGCGGGCGGC CGAGGCCATG
GGCGACGGCG GCCGTGCCCG CGAGCGCTTC CAGGCAGCGG CGCGCTTCCC GGCCACCTAT
TACGGCCAGC TCTCGCGCAC CAAGCTCGGC ATGGCGCCGG TGGTGCTGCG CTCGCCCTCG
CCTTCGTTCG ACAGCCGCAA CACCTTCGCC CGGCTGGAGC CGGTGAAGGC CATCCGCATG
CTTTATGCGG TGGGCGAGCG CGACATTCCC CTGACCATCT ATTACGACCT CGCCTGGCGC
ATGGAGGATC CGGCCCAGCT TGCCATGCTG GCCGACCTCG CCGAGGCAAA TGGCGACGCC
CGCGGCGCGC TGGTAGTAGG CAAGGAGGGC CTCGCGGAGG GTCATCCGCT GGAGGCGGAA
GCCTTCCCCA CCTTCGGCCT GCCCAGCTAC ACCCCCATCG GCAATCCGGT GGACAAGGCG
GCGATCTATG CGGTGGCGCG GCAGGAAAGC CAGTTCAACG CCCGCACGCT GTCCAGCGCC
AAGGCCATGG GCCTGATGCA GGTGACGCCC GAGGCCGGCC GCGAGGTCAC CAAGAAGACC
GGCGTGCCCT TCAGCGAATC CCGGCTCATG AGCGACCAGT CCTACAACGT GCAGTTCGGC
GCCGCCGAGT TGGGCGAGCT GGTGCAGAAT TACGGCGGCA ACTACGTGCT GGTGTTCGCC
GCCTACAATG CCGGGCGCGG CAGCGTGGCC AAGTGGATCC AGCGCTACGG CGACCCGCGC
GACCCGGACG TGGACGTGGT GGACTGGGTG GAATCCATCC CCTTCTCCGA GACCCGCAAC
TATGTGCAGC GGGTGATGGA GAACTACCAA GTCTACAAGG TACGCTTCAA CATCCCCTCC
AAGCTGCAGA TGGAAGCCGA CCTGCGCGGC GGCCGCTGA
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| Protein sequence | MSPVSSLISV SALALALAWS GAMPALAETT PTAKPASAKD SAKDAKAKDS KAKDTHSAKD
TKAKDAKAHD SKAKDAKAKD TKPTGNAKAS ADAKSGKDAK AHKDAAKPST SKPSGKPATA
RAPAATPQVA PTLGASSNIP GGDLAALKVA VNAAKNGRAA EAMGAAQQLD DPAARSLVTW
LVIRHAPNDL GFDAINQFLK DKPGWPTQNT LRRRAERVLF QENRDPAKAR DFFAEQPPLS
GEGKIALARY LVAAGNRSDA ADWVREAWRE DELNESFESK IIDEFSGFLT RTDHKLRADR
FSYKPDPDRA LRAAARAGSD IVALTKARMA IAKKDSNGEK LLAQVPFNLS SDPAYLFAKS
QLARRADKPQ DAARALLAGA TSDQVRADPD EWWIERRLVA RELLDAGDFQ TAYKVAATGV
PPKADNYRAE QHFTAGWIAL RFLKDPRTAA QHFAKIDDDQ KHPITLSRAY YWQARAAEAM
GDGGRARERF QAAARFPATY YGQLSRTKLG MAPVVLRSPS PSFDSRNTFA RLEPVKAIRM
LYAVGERDIP LTIYYDLAWR MEDPAQLAML ADLAEANGDA RGALVVGKEG LAEGHPLEAE
AFPTFGLPSY TPIGNPVDKA AIYAVARQES QFNARTLSSA KAMGLMQVTP EAGREVTKKT
GVPFSESRLM SDQSYNVQFG AAELGELVQN YGGNYVLVFA AYNAGRGSVA KWIQRYGDPR
DPDVDVVDWV ESIPFSETRN YVQRVMENYQ VYKVRFNIPS KLQMEADLRG GR
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