Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3576 |
Symbol | |
ID | 5421503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3998250 |
End bp | 3999407 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640882830 |
Product | lycopene cyclase |
Protein accession | YP_001418461 |
Protein GI | 154247503 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01789] lycopene cyclase [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.243504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG TCTTCGTCGG CGCCGGACTT GCCAATTGCC TTATGGCGGC GCGCCTCGCG GCCCAGCGTC CCGGCCTTCA CATGCTGCTG CTGGAAGCCG GCGAGAGCGT GGGCGGCAAT CACAGCTGGT CCTGCCACGA CAGCGATCTC ACTGCCGCGC AGCGCGCCTT CCTCGCTCCC TTCCAGAGCT ATCTCTGGGC CGGGCACGGG GTGCATTTTC CCGCTTTTTC GCGCACGCTC AAAGGCGGCT ACGCCACCAT TTCCTCCGAG CGCATGGCCG AGGTGATGAA TGAGCGCCTG TGCGCCGCCA TCCGCACCAA TGCCCGCGTC GCCCATGTGG CGCCCGACCA CGTGGTGCTG GAGGGCGGCG AGCGCATCGA CGCCCGCGCC GTGGTGGACG GGCGCGGCCC ACTCGCCTCG CGCCATCTCG ACCTCGGCTA CCAGACCTTC CTGGGGCAGG AACTGCGTAT GTCTCGGCCC CATGGCCTCA CCCGCCCCAT CATCATGGAT GCGCGGGTGG AGCAGCTGGG CGGTTACCGC TTCGTCTATG TGCTGCCGCT GGACGATGAC ACGCTGCTGG TGGAAGACAC CTATTATGCC GACGGCCCGG ATCTTCCCGC CGATGCCTTG CGCGGCCGCA TTTCCGCCTA TGCCGCGGCG CAGGGCTGGG CCGTGGATTA TGTGGTGCGG GAGGAGGACG GCATCTTGCC GATAGCGTTG GGCGGCGACA TCAACGCCTT TCTTGCCGAG ACGCCTTCGG GCGTCGCGCC CGCCGGACTG CGGGCAGGCC TGTTCCACCC CACCACCGGC TACAGCCTGC CCGACGCCAT GGCCCTGGCC GACTCGGTGA GCGCGCTTGC CGACCTTTCC GGCCCCGCGC TTTCGGCGGC AGTGCGCAGC CATGCGGCGG CGGCGTGGAA CGGGCGCGGC TTCTTCCGCC TGCTCAACCG CATGCTGTTC CGCGCTGCCG ATCCGGAGCG GCGCTATGCC ATTCTCCAGC GCTTCTACGG GCTGTCGGAA GACCTGATCG CCCGTTTCTA CGCCGATCGC CTCACCCTTG CCGACAAGGC GCGCATCCTT TCGGGCCGCC CACCCGTATC GGTGTTCAGG GCGCTCTCCT GCCTTGTTGA GACGAAAGCC GCACCCGGTT CCCCATGA
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Protein sequence | MDIVFVGAGL ANCLMAARLA AQRPGLHMLL LEAGESVGGN HSWSCHDSDL TAAQRAFLAP FQSYLWAGHG VHFPAFSRTL KGGYATISSE RMAEVMNERL CAAIRTNARV AHVAPDHVVL EGGERIDARA VVDGRGPLAS RHLDLGYQTF LGQELRMSRP HGLTRPIIMD ARVEQLGGYR FVYVLPLDDD TLLVEDTYYA DGPDLPADAL RGRISAYAAA QGWAVDYVVR EEDGILPIAL GGDINAFLAE TPSGVAPAGL RAGLFHPTTG YSLPDAMALA DSVSALADLS GPALSAAVRS HAAAAWNGRG FFRLLNRMLF RAADPERRYA ILQRFYGLSE DLIARFYADR LTLADKARIL SGRPPVSVFR ALSCLVETKA APGSP
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