Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3048 |
Symbol | |
ID | 5424748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3386410 |
End bp | 3388236 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640882294 |
Product | UvrD/REP helicase |
Protein accession | YP_001417935 |
Protein GI | 154246977 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0267526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.137348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGACC TAACAGAAGC GCAGAAGGAA ATTCTACAAG CTGTCGGGCA TCAACTCGTC ACCGGCGGTC CCGGTTCGGG GAAGACTACC GTCTCTATCC TCAAAGCGGC CAAGATCGCG CGGGAGGAAT TGAAGCCAGG ACAGCGCATC CTTTTCCTCA GCTTCGCGCG TGCAACCGTT TCGCGCGTGC TGGAGGCAAT CGACGAAGAA AGCGCAATCA CGCGAGAGGA GAGGCAACGG ATCGAGGTCG ATACCTACCA TTCGTTCTTC TGGCGCATCC TTAAAACGCA CGGCTACCTT GTCGGCTTTC CACGACGGAT GACGATCCTC ACGCCTCCGA ATGAGGCGAT TGCATTGTCG GCGGTTCGAA GCGGCTACAA GGCGGCCAAA AATCTGTCGG ACGAGGAAAA GGCTGAGAAG CGCGCGAAGG AGGAAGCGGA GCGTGTCCGG CTGGCGACCG AAGAAGGGAA GGTCTGCTTC GACCTCTTCG CAGACCGCGT GGCGACCCTG CTTCATGGCT CAGATAAGGT TCGAGCGCTC GTCTCTACGA TGTATCCGTA CATTACCCTG GACGAGTTTC AGGACACCAG CGCCGATCAA TGGCGAGTGG TCCAAGCCCT CGGCGCCAAC AGCACGTTGA TCGCTCTTGC CGACCCGGAG CAGCGCATAT TCGATTTCAT CGGCGCCGAT CCGGAAAGGC TGAACCACTT CAAGGCCGAT TTCGCGCCGA CGGTCCACGA CCTTGCCGGT GACAACCATC GGAGCAAGGG GACGGAGATT GCCCTATTCG GCAACGACAT CCTGACCGGC AATTTTCGGC AGAAGGAATA CCAGGGTATC GGCTACGCGC CGTTCGCGTC GAACCCCAAC CAAGCTTATG CTTCACTGGT TGGCCAGGTG TTGCAAGCCC GGAAGCGCTT GGTTGAGTCT GGCCGGCGTG ACTGGTCGTT GGCCATTCTC GTGCCGACCA AGAAAATGAC GCGGATGGTG TCTGACATCC TGCGCGAGCC ATTCGGTAAT GTTCCGTCGA TTTCTCACTC AGCAGCAGTT GATATGGAAG GCCCGATCCT CGCCGCAGAG ATCATTGCTT TCCTGCTCCA AAAGTGCGGG CATGACGGAA GTTTCGACGA ATTTGTCGAG TTGATGTGCA GCTATTTTCA CGGTCGAGGA GGCACGGCGC CGACCAAGGG CGACATGGAC GAGGCTGCGC GGTTCCGGAA GGCGCTGTCC AAGTGGAACG AATGTCTAGC GAAAGGACGA ACAACGCCTG GTAACAGCGT CTTGCAAGGA ACCTTTGCCG TGCACCAGGC AACTGCCGCA CTGACATTCA CAGGTGATCC GGATGCAGAT TGGGTCTCGG TGCGCGACGT TCTGGATACT GGGGCCTGTG AGCGACTGAA GGATGTCGCA AAGGACGTCC GTAACGTGCG TCTGCTTGAG CGCGGTACGC AGCTCCGTCA GGGGTTGGCG CAGGACTGGC GTGACGTCGG CCGCTATAGC AACGCCCTTG CGATCACCCG CCAGTCGTTT GTTCAGGAGC ATTTCGCAAC AGCCCACAAG CCTGAATCCG GCGTCGTGGT GATGAACATG CACAAGGCGA AGGGAAAGCA GTTCGACGAG GTTGTGATCT TTGAAGGATG GCCAAAACGG TTCAAGGGCG AAATCGTGGC CAATCCTGAC CGGATCGTCT TCGGCAATGT CCACGACGGG GTGATGACTC AGGCGCGTCA GAATTTTCGG GTCAGCATCA CGCGCGCAAA GGCACGCACG ACGATCATGA CACCAAGGGA TGATGTCTGT GTTTTGCTCA GACCCGTACC GGCATGA
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Protein sequence | MVDLTEAQKE ILQAVGHQLV TGGPGSGKTT VSILKAAKIA REELKPGQRI LFLSFARATV SRVLEAIDEE SAITREERQR IEVDTYHSFF WRILKTHGYL VGFPRRMTIL TPPNEAIALS AVRSGYKAAK NLSDEEKAEK RAKEEAERVR LATEEGKVCF DLFADRVATL LHGSDKVRAL VSTMYPYITL DEFQDTSADQ WRVVQALGAN STLIALADPE QRIFDFIGAD PERLNHFKAD FAPTVHDLAG DNHRSKGTEI ALFGNDILTG NFRQKEYQGI GYAPFASNPN QAYASLVGQV LQARKRLVES GRRDWSLAIL VPTKKMTRMV SDILREPFGN VPSISHSAAV DMEGPILAAE IIAFLLQKCG HDGSFDEFVE LMCSYFHGRG GTAPTKGDMD EAARFRKALS KWNECLAKGR TTPGNSVLQG TFAVHQATAA LTFTGDPDAD WVSVRDVLDT GACERLKDVA KDVRNVRLLE RGTQLRQGLA QDWRDVGRYS NALAITRQSF VQEHFATAHK PESGVVVMNM HKAKGKQFDE VVIFEGWPKR FKGEIVANPD RIVFGNVHDG VMTQARQNFR VSITRAKART TIMTPRDDVC VLLRPVPA
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