Gene Xaut_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2213 
Symbol 
ID5421658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2475361 
End bp2476287 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID640881466 
Producthypothetical protein 
Protein accessionYP_001417114 
Protein GI154246156 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.292035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCC GCCCGAATCG CCAATCGCCC CTTGGGCTTG TCCTCGGCCT CGTCGCCGTC 
GTCATGTTCG GCGCGACGCT GCCCATGACG CGGCTCGCCC TGCACGACCT CAGCCCCTGG
TTCATCAGCT TCGGCCGCGC GGCGCTGGCC GGCTTCTGCG CGCTCGCGGT GGTGCTCGTG
CTGCGCCGGC CGTGGCCGTT CGGCGCGCGC GAGACCCGGC GTGACCTCGC GCTGGCCACC
CTTGCTCTGG TGTTCGGCTT TCCCATCCTC ATCGGGGTCG CGACCCAGAC TGTCCCGGCG
GCCCATGGCG GCATCGTGCT CGGCCTCCTG CCGTTGTGCA CCGCCATCGC CGCCACGGTG
CTCGCGGGAG AGCGTCCCGG CCTCGGCCTG TTCGCGGCCA GCGCGGCGGG GGCGGGGCTG
GTGGCCGCCT TCGCCCTGCG CAACGGCGCC GCGGGCGGGT TCGGCTATGG CGACATGCTG
CTCTTCCTCG CCGTGGTGAT CTGCGCCGCC GGCTATGCCG TTTCCGGGCG TCTCGCCCGG
CGCATGGCGG GTTGGGAGGT GATCGCCTTC ATGCTCATCC TCGCCCTGCC GGTCACGGTG
CCGGCGGCGC TCCTGACCTT TCCGTGGGGG CGGGAGGTGA CGGGCGAATC GTGGGCGGCG
CTGATCTATC TCGGCCTGTT CAGCCAGTTC ATCGGCTTCT TTTTCTGGAA TGCCGGGCTG
GCGCTGGGCG GCATCGCGCG GGTGGGGCAG ATGCAGTTGC TCCAGACCTT CGTCACGGTG
GGCCTCGCCT GGCCCATCAA CGGCGAGCGG CCCGATGCGG AGACCCTGCT GTTCGCCCTT
GCCGTGGCCG TGGTGGTGGC GCTGGCCCAG CGGGCGGGCC GGCGGCGGCC GGTGGCCTCT
GCCGTCGATC CGGCGGGACC TGCCTGA
 
Protein sequence
MDRRPNRQSP LGLVLGLVAV VMFGATLPMT RLALHDLSPW FISFGRAALA GFCALAVVLV 
LRRPWPFGAR ETRRDLALAT LALVFGFPIL IGVATQTVPA AHGGIVLGLL PLCTAIAATV
LAGERPGLGL FAASAAGAGL VAAFALRNGA AGGFGYGDML LFLAVVICAA GYAVSGRLAR
RMAGWEVIAF MLILALPVTV PAALLTFPWG REVTGESWAA LIYLGLFSQF IGFFFWNAGL
ALGGIARVGQ MQLLQTFVTV GLAWPINGER PDAETLLFAL AVAVVVALAQ RAGRRRPVAS
AVDPAGPA