| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1421 |
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| Symbol | |
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| ID | 5421336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1624623 |
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| End bp | 1628618 |
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| Gene Length | 3996 bp |
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| Protein Length | 1331 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640880669 |
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| Product | AsmA family protein |
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| Protein accession | YP_001416326 |
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| Protein GI | 154245368 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.492476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGGGA TATTGATCAG CCTCGCCACG GCGGTGATCC TGGCCATCGG CGGGGCGTTC
GCAGCCCCGT TCGTGGTGGA CTGGAACGCC TGGCGCGGAA CGTTCGAAAC GCAGATCAGC
CAGGCGCTCG GCGTTCCGGT GGTCATCCGC GGCCCCATCG ACGCCGAGAT CCTGCCTGCC
CCGCGAATCC TGCTGCGCGA TGTCACCCTC GGCGACGTGG TCTCCACCGG CGGCACGGTG
AAGGCGCTCC GGGCCGAACT CTCCCTCGGC GCCCTGCTGC GGGGCGATAT GGAGGCCACC
GGCGTCAGCC TGGACCGGCC GCAGATCCGC CTCGTCATCG ACAGCGCCGG GCGGCTCGCC
CTGCCCACCG GGGCCCAGCG CCCCGCCGCC CTCTCCATCG CCCGGTTCGA GGTGAAGGAT
GGCACCCTCG ACATCCTCGA CCGCGCCTCC GACCGCACCC AGACCCTGGA CGGCCTCAAC
CTGAAGGGCG AGGCGCGCTC GCTCGCCGGT CCCTTCCGCC TCGACGGCGA GGTGGAGGCC
CAGGGCGCGC GGTTCGCCAT CCGCTCAACC CTCGGCAAGA TCGGCGATGA CGGCACCGGC
CGCCTGCGCC TGGTGCTCGA CGGTCGCAAC CGGCCCTATG CCCTCGATCT CGACGGCGGC
CTCGCCTTTG CCGGCGCCAA GCCGAAGTTC GAGGGCCGGG CCATTCTCTC GCGCCATGGC
GGCGAGGGGC TGGAAGCCTG GCAGCTCTCC GGCACGCTCA AGGCCAGCCC CGACGCTGTG
CTTGCCGACA GCCTGGACCT CGCCCTGGGC GGGGCCCAGA CGCCGGCCCA GCTCTCCGGT
TCCGCCCGCC TCGCGCTCGG ACGAGCGGTG GGCCTCGACG CCGTGCTCAA CGCCCGCAGC
CTCGACCTCG ACGCCCTGCG CGCCGCCACC GACGGCACGC CGAACACGGC AAAGGACAAG
GCGACGGCGG ACCAGAACCC CGCCGCTGCT CTGGCGCGCT TCCTCTCCGG CGTGGCGGCC
CTGCCGTCGC CGGACATCGC CTCCCGCGTC GGCCTGTCGG TGGAGCAGCT CATGCTCGGC
GGCACGCTGG TGCGCGACGT GCGCGCCGAT ATTTCCGGCT CCGCCGCCGG CTGGCGGGTG
GACAATGCCG AGGCCCAGCT GCCCGGCAAG GCGGCGCTGC GCCTCTCCGG CAAGCCCACG
AGCGGGCCCG GCGGCGGCGG CTTCGATGGA ACCGTGACCT TCTCGGCGGA CGACCCCGCC
ATCTTCCTGC GCTGGGCGGC GCCCACCGCC CCGCGCGACT ATGTGGCGGC GGCGAAGGGC
CCGGTGCGCA TCACCGGCAA GGTGAATGCC GGACCGACGC GGATCGCGGT GGACGGGCTA
GATGCCACCT TCGCTGCCAG CCGGGTGCGC GGCTCGGTGG TGGCGGCGCT CGATGCCGGC
GCCCCGCCCA AGCTCAACCT CAAGCTCTCC CTCGACGGCT TCGACCTCGA CCCGCTGGTG
GCCGCGCTCC AGACCGCCGC GGCTGCGGTG GGGGGCGGCG CCGACGGCAC ACTGACGCTC
GACGGGCGCA ACCTGATGCT CTCCGGCCTG CCCCTGCGCG GCCTCACCCT TGATGCGGCG
GCCACCGGCG GCAACTGGCG CCTGTCGCGC ATCGTCATGG ACGACCTTGC CGGCATCCGC
CTCGAAGGCG CGGGCCGCAT GGAGAATTTC TCCACCACGC CGCGTGGCGA GTTCAACTTC
GCCTTGTCCG GCGCCAAGGC GGACGGGCTC GTGCCCCTCG CCCGCCTGGT GGCCGGCGAG
CAGACGGCGC AGGTGCTGGC CACGCTCCAG CCCGTCGCCG CCCCGGTGAA GCTTGCCAGC
ACCGTGGTGT GGGGCGAGGC TGGCGGCCGC AACATCACGG TGGCCGGCAC GCTCGGGCAG
ATCTCCGGCG ATGTCACCTT CGCCCGCAAC AATGCCGGCG TGCCCCTGCG CATTGCGCTC
AAGGCCGATG CGGCGGACGG GGCGCGGGCG CTGGCGGCCT TCGGCGTGGA GGGCCTCGCC
CCGCGCCTCG GCCCGGCCCA TGCGGAGCTG TCCGTCTCCC CCCTCACCCA GGACGAGGCC
CAGGTGCGCG GCCGGCTCAC GCTCGCCGAC ATGACCGCCC AGGCCGAAGG CACCGCGCGC
CTGTCCGGCG GCGCTGTCGA GCCCAGCCTC GCGGTGCGGC TCGATGGCGG CGACCTCGGC
CGCGTGCTGC CCCAGGCTTC GGCTGCGGTG GAAGGGCCGG TGCCATCGGC CCTCGCCTTC
ACCCTTGCCC GCACCGGCGG GATCTGGCGG CTCGATACCA TCACCGGCTC GCTGGCCGCG
GCGCCGGTTT CCGGCAACAT GGAGTTCGAG CCCGGCCCGG TGCCGCGCAT CGGCGGCAAG
CTGGCGTTTG AGAGCCTCTC CCTGCCGCGC ATCCTCGGCA TGTTCGCCGC CCGCACCGGC
ACGGAGCCTG CGGGCGCCGG CGCCTGGAGC GCGGCGCGGC TGCAACCCGC GGCGATCTCG
GGCTATAGCC TCAATCTGGA GCTGACGGCT GCCCGCCTTG CGGTCATGGG TCCCTATGTT
CTCGGCAACG GTCGCCTCGT GCTCGGCAGC GACGGCGCCG ACCTCGACGT GCGCGATGTG
GCCGGAAGCC TGGGCGGCGG ACGCGCGGCG GCCAGCCTGC GCCTGCGCCG GCAGGGCGAC
GGCGTGCAGG CGGACGGCCG GCTGGTGCTG GAGCAGGTGG ATGCGACGGC GCTGCTGGCA
CCCACCGGCG CGCGCGCAGC CCCCAAAGGC AAGGTCAACC TCCTGGTGGA CCTGGGTGGA
TCCGGCCGCA GCGTGCTGGC CGTGGTGCAG AACCTCTCCG GCCAGGGGAC GCTGGGGGTG
CGCGACCTTG TCATTGATGG TGCCAGCCCC GCCGGCCTCG ATCAGGCGCT GGCGGAAGCC
GCCGGCCTGT CGCCGCCGCC CGACGAGCGG CGCGCGGCGC AGATGCTCGA CCGCAGCCTC
GCCAGGGGGC AGCTGCGCAT CGGCTTCGTC GAGACCACGC TGGGCGTGGT GAACGGCGTT
GCCCGCCTGT CCCCCGCCCG CGCCACTGCC GACGGCGTGC GCGTGGGCTT CAACGGCAGC
TTCGATCTCG CCCGCCTCGC CTTGGACACC ACCGTGGACC TGGAAGCCCC CGAAGGCGCC
GGCGGCGCGC CGGGCGGCAG CATCGTCTGG CGCGGCCCGG TGACGGGTCC CGAACGACGG
GTAAGCGCCC CCGCCCTCAC CAGCGTCATC GCCATGCGCG CCATCGAGCG CGAGACGCGA
CGCCTGGAGG AACGCCAGGG CCGCGCCGCG CCCGAGGCCC CAGCCGGAAC CGCGCCCCCG
GTCGCGCCCC CGTCGGCCCA GCCCGTGGCG GCGCCGGCGC AGATCCCCGC GCCTGCGGCC
ATTGCCCCGG TCGCACCATC GGTGCAGCCG CAGCCCGTTC AGGCCCAACC CGCGCCGGCT
CCCGCCGCCG CGAAACCCGC TGCGCCGGCT CAGACGAGCG CCCCGCCGCC GGCTCCGCGA
CCGGCGGCAC CGGCCCCCGT CGCAACGGCG CCAGCAGCTC CTGCGCAGCC GGCGACGTCT
CCTGTGCCGC AAGCCGTGCC GGCGGCACCT GCCCAGACGG CCGCGCCCCA GCCCACACCG
ATGCCCTCGT CGGCTCCGTT GCCGCAGGCC ATTGAGCGGC GCGAGCCGCC GCCGGTCGGC
TTCGGCGCGC CCACGGCATC GGGTGCCGCC GGCACCGCGA CGCCGGCCGA GTCTCAGGCT
CAATCGAGCC CGTCCCGGCC GGAGGCCCGC GCCACGCCGG AAGCGGCCGA GCGCCACACG
CCCGTGGTGC GCCAGCCCGC GCCGCGCCGG ACCGAGCGTG CGCAGCCCGA GCCGCCGCCA
CGCGTGTTCA CCCCGCTTCC GCCGGAAACC ACCCTGCCGC CCACCCGCGG CTTCGGCGAC
CTGCCGCGCC CGCCGGGCCT CGTGGGGGCG CAGTAG
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| Protein sequence | MQGILISLAT AVILAIGGAF AAPFVVDWNA WRGTFETQIS QALGVPVVIR GPIDAEILPA
PRILLRDVTL GDVVSTGGTV KALRAELSLG ALLRGDMEAT GVSLDRPQIR LVIDSAGRLA
LPTGAQRPAA LSIARFEVKD GTLDILDRAS DRTQTLDGLN LKGEARSLAG PFRLDGEVEA
QGARFAIRST LGKIGDDGTG RLRLVLDGRN RPYALDLDGG LAFAGAKPKF EGRAILSRHG
GEGLEAWQLS GTLKASPDAV LADSLDLALG GAQTPAQLSG SARLALGRAV GLDAVLNARS
LDLDALRAAT DGTPNTAKDK ATADQNPAAA LARFLSGVAA LPSPDIASRV GLSVEQLMLG
GTLVRDVRAD ISGSAAGWRV DNAEAQLPGK AALRLSGKPT SGPGGGGFDG TVTFSADDPA
IFLRWAAPTA PRDYVAAAKG PVRITGKVNA GPTRIAVDGL DATFAASRVR GSVVAALDAG
APPKLNLKLS LDGFDLDPLV AALQTAAAAV GGGADGTLTL DGRNLMLSGL PLRGLTLDAA
ATGGNWRLSR IVMDDLAGIR LEGAGRMENF STTPRGEFNF ALSGAKADGL VPLARLVAGE
QTAQVLATLQ PVAAPVKLAS TVVWGEAGGR NITVAGTLGQ ISGDVTFARN NAGVPLRIAL
KADAADGARA LAAFGVEGLA PRLGPAHAEL SVSPLTQDEA QVRGRLTLAD MTAQAEGTAR
LSGGAVEPSL AVRLDGGDLG RVLPQASAAV EGPVPSALAF TLARTGGIWR LDTITGSLAA
APVSGNMEFE PGPVPRIGGK LAFESLSLPR ILGMFAARTG TEPAGAGAWS AARLQPAAIS
GYSLNLELTA ARLAVMGPYV LGNGRLVLGS DGADLDVRDV AGSLGGGRAA ASLRLRRQGD
GVQADGRLVL EQVDATALLA PTGARAAPKG KVNLLVDLGG SGRSVLAVVQ NLSGQGTLGV
RDLVIDGASP AGLDQALAEA AGLSPPPDER RAAQMLDRSL ARGQLRIGFV ETTLGVVNGV
ARLSPARATA DGVRVGFNGS FDLARLALDT TVDLEAPEGA GGAPGGSIVW RGPVTGPERR
VSAPALTSVI AMRAIERETR RLEERQGRAA PEAPAGTAPP VAPPSAQPVA APAQIPAPAA
IAPVAPSVQP QPVQAQPAPA PAAAKPAAPA QTSAPPPAPR PAAPAPVATA PAAPAQPATS
PVPQAVPAAP AQTAAPQPTP MPSSAPLPQA IERREPPPVG FGAPTASGAA GTATPAESQA
QSSPSRPEAR ATPEAAERHT PVVRQPAPRR TERAQPEPPP RVFTPLPPET TLPPTRGFGD
LPRPPGLVGA Q
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