| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1090 |
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| Symbol | rpsA |
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| ID | 2737745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | - |
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| Start bp | 1048264 |
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| End bp | 1049916 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637173243 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | NP_966811 |
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| Protein GI | 42520896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.365976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA ATAATCCAGT CGTAAATCTA CCGGTTACTA TCAGAAAGCT ATCATCAAAC
AAATTTATAG AAGAGATATG TCAAGGCCAA TTTGAGGATC AAGATAATAC CTTGTTTGAA
GATTCTTTTG TTAACAAAAT TAAAGAAGGA GATGTGGTAG AAGGTGTAAT TACAAGAATA
AACCCTAACG ACGTTGTGGT TGATATTGGT TTAAAATCTG ACGGGAGAAT TCTGATCAAG
GAACTCGGTT GTAATGATGA GGTCATTATT GGCTCGAAAA TCAGAGTTTA TGTGGAAAGA
ATTGAAGATT ATCATGGTAA TGTTGTTCTT AGTCGTGAAA AAGCAATTAG GGACGAAAAA
TGGAATAAGT TGGAAGAAGA TACAGTTACA AGGGCTGAAG TAAGCGGAGT TATTAAACGC
TCAATTAAAT GTGGCTTTAT TGTTGATCTT GGTGACGGAA TAAGCGCTTT TTTACCGCTG
AGTCATGTGG ATTTGAAGCA AGTAAAAGAT GCGAAGCACC TTATTGAAAC TGAACAAAAG
TTCATCGTGC TTAAAATGGA TAAGAAGCAG GGCAATATTG TAGTATCAAG AAAGCTGGTG
TTAGAAAAAT TGCACGCTGG TGAAAAAATT AAATTTTTAG AATCTTTAAA TGAAGGCGAT
ATAATAGAAG GGAAAATAAA AAGTATCACT CATTACGGTG TATTTGTCGG TATTCATGAA
TCAGATGTAG TGGGAGTTAT AGATGGATTG TTACATATTA CAGATATCTC TTGGAGTAGG
GTAAGTCATC CGTCTGCAGT TTTTACTTGT GGTCAGACTA TAAAAGTTAA AATTATAAAA
ATAGATAAGG AAAATGCTAA AATTTCCTTG GGTGTGAAGC AGCTAGAAGA TAGCCCTTGG
CAAGATGCAG AGTCAAAATA TCCAGTTGAT AGTGTGCATA AGGGTTATGT AACAAGCATA
GAAGATTATG GATTATTTGT TGAGCTTAGA CCTGGAATTG AAGGTTTAGT GCACTCGTCA
GAAATAACTT GGGTTAAGAG TAATTTACCA GTTAGTAGTC TCGTAACAAG GGGACAAGAA
GTATATGTAA AAATTCTCAG TATTGACATT GCTAAGAGTA GGATGAGTTT AAGCATGAAA
AGGTGTGTAG ACAACCCTTG GCAAGTATTT ATCAATAAAT ATCCTCCTGG TTCTATTGTT
TCTGGTGAAG TGAAGAATAA TACCGGCTCA TATGTATCTG TTGCTTTCGG TGATTCTGAA
ATAGATGAGA ACGTAGAAGG GACAATATAT GTGAAAGATT TTAGTTGGTC TAAAAACGGT
TCAGATGAGA TAAAGAAGTA TAATGTAGGT GATAAAATAG AAGCAAAAGT AATAAGGGCT
AACGTGAATC GGGCAAGAAT TTATCTTGGA ATAAAACAAA TAGAGTATGA TCCTCTTGAA
GAACTGATAA AGAAAGTTAA GGTAGGTGAT AAAATACAGG TTATTGTAGA TAAGAGAGAA
AATAATGGAC TAGTCGTTGA AGTTGAGAAC GATGTAACCC TTCTAATAGA TCAAGAGCAT
TTACCAGAGA ATAAAAAATT CTCTATATCA GAAAAAATAG AAGTTGAAGT ATTGGGTGTT
GAAGAATATA ACATAGCATT ATCTGCTAAG TGA
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| Protein sequence | MNNNNPVVNL PVTIRKLSSN KFIEEICQGQ FEDQDNTLFE DSFVNKIKEG DVVEGVITRI
NPNDVVVDIG LKSDGRILIK ELGCNDEVII GSKIRVYVER IEDYHGNVVL SREKAIRDEK
WNKLEEDTVT RAEVSGVIKR SIKCGFIVDL GDGISAFLPL SHVDLKQVKD AKHLIETEQK
FIVLKMDKKQ GNIVVSRKLV LEKLHAGEKI KFLESLNEGD IIEGKIKSIT HYGVFVGIHE
SDVVGVIDGL LHITDISWSR VSHPSAVFTC GQTIKVKIIK IDKENAKISL GVKQLEDSPW
QDAESKYPVD SVHKGYVTSI EDYGLFVELR PGIEGLVHSS EITWVKSNLP VSSLVTRGQE
VYVKILSIDI AKSRMSLSMK RCVDNPWQVF INKYPPGSIV SGEVKNNTGS YVSVAFGDSE
IDENVEGTIY VKDFSWSKNG SDEIKKYNVG DKIEAKVIRA NVNRARIYLG IKQIEYDPLE
ELIKKVKVGD KIQVIVDKRE NNGLVVEVEN DVTLLIDQEH LPENKKFSIS EKIEVEVLGV
EEYNIALSAK
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