Gene Veis_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3835 
Symbol 
ID4691702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4233228 
End bp4233941 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID639851584 
ProductABC transporter related 
Protein accessionYP_998562 
Protein GI121610755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.554718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCGA TATTGCAGGT TCAGGGCCTG GTTGCAGGGT ACGGCAACAT CGAAGCCGTG 
CATGGCGTCT CGTTGGATGT GGCGGCTGGC GAGTGCGTGG CACTGATCGG CCCCAATGGG
GCAGGCAAGT CCACCCTCCT CAAAGCAATT TGCGGCTTGG TGGAGGTGAC GGGCGGCGAC
ATCATTTTTG ATGGCCATCC GTTGCGCGCG ATGCCTGGGT CTGCGATTGC CGCCCTGGGG
GTGAGCATGT GCCCCGAGGG GCGCCAGGTC TTTGGCGAAA TGAGCGTGTT GGAAAACCTG
CGCATGGGGG CCTACAGCCG GCGTCATGAT CCCGCCTGGA AGCACGACCT GGAGGAGATG
CTGGAATTGT TTCCTCGCCT GCGCGAGCGC ACCGCTCAGA AGGCCGGCAC GCTATCTGGC
GGAGAGCAGG AAATGCTGGC GATTGCCCGG GCGCTGATGG CACGGCCCCG CCTGTGCCTC
CTCGACGAAC CCTCGCTGGG GCTGGCGCCC AAGATTGTCG ATGAGGTCGA GCGCTGCCTG
ATGGCGATCA AGCAGCGCGG CGTGACCATG CTGCTGGTCG AGCAGTCGGT CTCCATGGCT
TTGCGTGTGG CAGATCGTGG CTATGTGCTG GAGACCGGGC ATGTGGCGCT CAGTGGCAGC
AGCGCCAGCC TGCGCGACAA CCCCGAGATC AGCAATGCCT ACCTGGGGCA TTGA
 
Protein sequence
MKPILQVQGL VAGYGNIEAV HGVSLDVAAG ECVALIGPNG AGKSTLLKAI CGLVEVTGGD 
IIFDGHPLRA MPGSAIAALG VSMCPEGRQV FGEMSVLENL RMGAYSRRHD PAWKHDLEEM
LELFPRLRER TAQKAGTLSG GEQEMLAIAR ALMARPRLCL LDEPSLGLAP KIVDEVERCL
MAIKQRGVTM LLVEQSVSMA LRVADRGYVL ETGHVALSGS SASLRDNPEI SNAYLGH