Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1993 |
Symbol | |
ID | 4694332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2264553 |
End bp | 2265185 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639849759 |
Product | isochorismatase hydrolase |
Protein accession | YP_996763 |
Protein GI | 121608956 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.94623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCGG GCACGCAGGT GGGCACGCAC CAGAGCGCCG TGCTGGCGCT GCATTATCAG AACGATGTGC TGCACCCGCA CGGGAAAATC CGGGTCGGCT TCCACGCCGA TAGCGCACAG CGCCAGCATG TCATCGCGGC GGCACAGGCC CTGCTGAGCA AGGCCAGGGC TTGTGCGATT CCTGTCGTGC ATGTGCGCAT CGCCTATCGT CCCGACTATG CCGACCTGTT GACCAATGCC CCGATTTTTC GCCAGGTCGC CAGCCTTGGC GCGGTCTGCG AAGGCAGTTG GGGCGCCGGG TTTCATGCCG ACCTGGCGCC GCTGCAAGAC AGTCCGCGTG AATTCATCGT CAAACACACG CGCGTGAATG CCTTTCACGA CTCGCCGCTG GAGGGCATAT TGCGCATCCT CGCCACCCGG CGCCTGATTG TCGCTGGCGT GGCCACGCAC TCCGTGGTCG AGAGCACGGT GCGCCACGCG GTGGATATGG GCTATGAGGT CGTCGTCAAC GCCGATGCCT GTGCCGCAGG AAGCCCCGGA GCACACGCAG CCTCGCTGGA GAACATGCGC CTGATTGCCG AGGTGTGCGA CGGCCCGGCG AGTTTGTGGC GTCTCGATGC GGGGGCCTCA TGA
|
Protein sequence | MAAGTQVGTH QSAVLALHYQ NDVLHPHGKI RVGFHADSAQ RQHVIAAAQA LLSKARACAI PVVHVRIAYR PDYADLLTNA PIFRQVASLG AVCEGSWGAG FHADLAPLQD SPREFIVKHT RVNAFHDSPL EGILRILATR RLIVAGVATH SVVESTVRHA VDMGYEVVVN ADACAAGSPG AHAASLENMR LIAEVCDGPA SLWRLDAGAS
|
| |