| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1879 |
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| Symbol | |
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| ID | 4693619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2102163 |
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| End bp | 2103524 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639849646 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_996650 |
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| Protein GI | 121608843 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.909678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA CCACAGCCAC CACAGCCACC ACGCAGCGAC AACCGGCCGG CCTTCGTCGG
CGCACGCTGA TCCGGCGCGG CAGTGCTGCG CTCGGCGCCG CGCTGACGCT GGGCGCGCCC
ACGGTGTGGG GGCAGGGCAA GAAGACGCTG CGCTTTCTCA ACAGCGAAAC CTCGATCGAC
AGCATCCGCG CGCTGAAAGT CGCCTGCGCC GACTACGAAA GGCAGTTCGG CACCCGGATC
GTGATCGATT CCGTTCCCAT CGACGACGCC TTCATCAAGG TCACGACCTC GCTGCGCGGC
GGACAGCCCT ATGACATCGC CACGCTGGCC TTTGTCGGCC ATGTGCTGCT GTTGCAGGCC
GACGACCGCC TGATGCCGCT GACCGAACTG ACCAGCAAGC ACCAGTGGGG GCACAAAATC
CTGTTCCCGC TCAAGAACCA GGTCTACTGG TACCCCTATG ACTACAACCT GGCGTGGATC
TATTACCGCA AGGACCTGTA CGAGCAAAAG GGCCTGAGCG TTCCCAAGTC TTACGAGCAG
ATGCTCAAGA ACGCGCAGAC GCTGAGCGCC GATGGCCGCC ATGGCGCGCT GTTTCCGATC
GGCAGCAACG GCGCGACGAA CTGGCTGTCG TCGGGCTTCA TGTGGGCCGA GGGCGTGAAG
CTGTTCGACG ACCAGTGGAA CGTGCTGCTG GACAGCGCCG AGATGGCGCC CCGGGTGGGG
CGCTATCTGG ACTTTTTCGC CGCGCTCTAC AAGAGCATGC CGGCGGGCGC GAGCCAGGCG
GGCTTCGGCG AAATGCTCAG CAATTTTTCC TCCGACAAGG TGGCGCATGT GGCCTACGCC
GGGCGCATCA TCGAGGCGCT CGAGCGCAAC GCGCCGGCGC TGTCGACCCG CTACGGCATC
ACCCCCTACA TGGACAGCAA GGGCCGGGCG AAGGCGGTCA ACCACGGCTA CGACGGCTGG
GTGGTGCTCA AGACGCCGAA CTCCGACGAG GCCATGAAAT TCATGGCCTG GTTCACCGAG
CACCAGTACA TCAACTTCCT GCACACCGCG CCGCTGCACT TTCAGCCGCC CCGCCTGGAC
ATCTACGACG ACCTGCGCTG GCGCGCCCAC CCGCTGATCG CCAAGCACCA GGAGGCGGTC
GAGACGATGC GCAGCTTCAT CACCGACAAG TCGGTCATCC TGACTTCCGT GGATACCGAA
GGCCCGGCGC CCGATCTGCG CCCCGGCAAG GTGCTCGAAG GCTTCGTGAT CCCCGAAATG
CTGCAAAACA AGGTGCTGAA AAACATGCCG TCGGCCGAAT GCGTGAAGCT CGCCGCCGAC
AAGATGCGCA AGCTCACCGG GGCTGGCGCA GGTGCTGCGT AG
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| Protein sequence | MTETTATTAT TQRQPAGLRR RTLIRRGSAA LGAALTLGAP TVWGQGKKTL RFLNSETSID
SIRALKVACA DYERQFGTRI VIDSVPIDDA FIKVTTSLRG GQPYDIATLA FVGHVLLLQA
DDRLMPLTEL TSKHQWGHKI LFPLKNQVYW YPYDYNLAWI YYRKDLYEQK GLSVPKSYEQ
MLKNAQTLSA DGRHGALFPI GSNGATNWLS SGFMWAEGVK LFDDQWNVLL DSAEMAPRVG
RYLDFFAALY KSMPAGASQA GFGEMLSNFS SDKVAHVAYA GRIIEALERN APALSTRYGI
TPYMDSKGRA KAVNHGYDGW VVLKTPNSDE AMKFMAWFTE HQYINFLHTA PLHFQPPRLD
IYDDLRWRAH PLIAKHQEAV ETMRSFITDK SVILTSVDTE GPAPDLRPGK VLEGFVIPEM
LQNKVLKNMP SAECVKLAAD KMRKLTGAGA GAA
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