| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1696 |
|---|
| Symbol | |
|---|
| ID | 4694029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1889593 |
|---|
| End bp | 1891974 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639849457 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_996469 |
|---|
| Protein GI | 121608662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01075] DNA helicase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.99054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCAC AAGACCCGCT CCCGGATGCC CCATCGGCCG CATCCCCCCT TCTGGTCCAT
CTGAACCCCG AGCAACTCGC CGCCGTGACG CTGCCGGCCG GCCATGCGCT GATCTTGGCG
GGGGCGGGGT CGGGCAAGAC GCGGGTGCTC ACCACGCGCA TCGCCTGGCT GCTGCAAAAC
GGCCATGCCA GGCCCGGCAG TATCCTGGCC GTGACCTTTA CCAACAAGGC CGCCAAGGAA
ATGGTGGCGC GCCTGTCGGC GATGCTGCCG GTGCATGTGC GCGGCATGTG GATCGGCACC
TTCCACGGTC TGTGCAACCG CCTGCTGCGT GCGCACCATC AGGCTGCGGG CCTGCCGCAG
ACCTTTCAGA TTCTGGACAC GCAAGACCAG CTTGCCGCCG TCAAGCGCCT GTGCAAGCAA
CACAACGTTG ATGACGAGCG CTTTGCGCCC AAGGATTTGG CGCACTTCAT CGCCAACTGC
AAGGAGCAGG GCCTGCGCCC GAACGATGTG CAGGGCCAGG ACAGCAACAC CCGCAAGAAG
ATCGAGATTT ACCAACTCTA CGAAGAGCAA TGCCAGCGCG AGGGCGTTGT CGATTTTGGC
GAGCTGATGC TGCGCAGCTA CGAACTGTTG CGTGACAACG ATCACCTGCG TGCGCATTAC
CAGCGCCGCT TTGCCCATAT CCTGGTCGAC GAGTTCCAAG ACACCAACCA ACTGCAATAC
GCCTGGCTCA AGCAGTTGGC AGGCAATGTC GTGGACGGGC GCTACCAGGC GCACGGCAGC
GTGCTGGCCG TGGGCGACGA TGACCAGAGC ATCTACGCCT TTCGCGGTGC GCGCGTGGGC
AACATGGCCG ACTTCGTGCG CGAGTTCGGC GTGCAGCAGC AGATCAAGCT CGAACAGAAC
TACCGCAGCT ACAGCCATAT CCTGGACTCG GCCAACGCGC TGATCAGCCA CAACAGCAGC
CGCCTGGGCA AGAACCTGCG CACCACGCAA GGCCCCGGCG AGCCGGTGCG GGTGTACGAG
GCGAGCTCCG ATCTGGCCGA GGCGCAGTGG ATGGTCGACG AGATCAAACA ACTGCTGCGC
AGCGACGGCT TCGAGCACCG GGAGATCGCC GTGCTGTACC GCAGCAATGC GCAAAGCCGG
GTGATCGAAT CGGCGCTGTT CAATGCCGGC GTGCCTTACC GCGTGTACGG TGGTCTGCGC
TTTTTCGAGC GTGCCGAAAT CAAGCATGCG CTGGCCTATC TGCGCCTGCT GGAGAACCCG
CAGGACGACA CCAGCTTTGC GCGCGTGGTG AACTTTCCGC CGCGCGGCAT TGGTGCGCGC
AGCATCGAGG TGCTGCAAGA TGCAGCCCGC GCCGCCGGCT GCTCACTGTA CGACGGCGTG
AGCGCCGTGC CCGGCAAGGC GGGCATCAAC CTGGGCGCAT TCGTGGCGCT GGTCGATGGC
CTGCGCGCGC AGACACGGGG GCTGAATCTG CGCAGCATCA TCGAGCAGAT GCTCGAATCC
ACGCGACTGG TGGCGCACTT TTGCACCGAA AAGGAAGGCG CCGACCGCAT CGAGAACTTG
CAGGAACTGA TCAATGCAGC GGAGAGCTTC GTCACGCAAG AGGGCTTTGG CCGCGATGCC
GTGGCCTTGC CGCTGGATGA GCATGGCGGC GCTGCACCGC CCAAGCCACC GATGCCCGGC
ATCGTGGACG CCGACACCGG CGAAACCCTG TCGCCGCTGG CCGCCTTCCT GACCCATGCC
GCACTGGAGG CGGGCGACAA CCAGGCCCAG GCCGGACAGA ACGCCGTGCA ACTGATGACC
GTACACGCCA GCAAGGGGCT GGAGTTTGAT GGTGTGTTCA TCGGCGGCAT GGAAGAGGGC
CTGTTCCCGC ACGAGAACGC GGCCAGCGAG CGCGACACTC TGGAGGAAGA GCGTCGCCTG
ATGTACGTGG CCATCACCCG CGCGCGCCGG CGCCTGTATC TGAGCCATTC GCAAACGCGC
ATGTTGCATG GCCAGACCCG CTACAACATC AGGAGCCGTT TCTTCGACGA ACTGCCTGAG
GCGGCGCTCA AGTGGCTCAC ACCCAAGCGC CAGTCCTTTG CCGCGCTTGC TTCTCATTCA
GGAGCAGGCA GTGCATATTC TTCCAGTGCC AGGCAGTCAT TCGGTTTCAA ATCCGCAGGT
GCTGAATCAG GGGTCTTTGC CCATCTGCCG GTGCCGCCGC GCAAGGGCGC GCCCGCGCAT
GGTCTTGCCG CCGGCATTGC CGTGTTTCAC ACCAAGTTCG GCGAAGGCAA GGTGCTGGCC
CTTGAAGGCA GCGGCACCGA TGAGCGTGCC CAAGTCCATT TTGCGCGCCA CGGCAGCAAA
TGGCTGCTGC TGTCGGTGGC CAAGCTGACG GTGGTGGATT GA
|
|---|
| Protein sequence | MFPQDPLPDA PSAASPLLVH LNPEQLAAVT LPAGHALILA GAGSGKTRVL TTRIAWLLQN
GHARPGSILA VTFTNKAAKE MVARLSAMLP VHVRGMWIGT FHGLCNRLLR AHHQAAGLPQ
TFQILDTQDQ LAAVKRLCKQ HNVDDERFAP KDLAHFIANC KEQGLRPNDV QGQDSNTRKK
IEIYQLYEEQ CQREGVVDFG ELMLRSYELL RDNDHLRAHY QRRFAHILVD EFQDTNQLQY
AWLKQLAGNV VDGRYQAHGS VLAVGDDDQS IYAFRGARVG NMADFVREFG VQQQIKLEQN
YRSYSHILDS ANALISHNSS RLGKNLRTTQ GPGEPVRVYE ASSDLAEAQW MVDEIKQLLR
SDGFEHREIA VLYRSNAQSR VIESALFNAG VPYRVYGGLR FFERAEIKHA LAYLRLLENP
QDDTSFARVV NFPPRGIGAR SIEVLQDAAR AAGCSLYDGV SAVPGKAGIN LGAFVALVDG
LRAQTRGLNL RSIIEQMLES TRLVAHFCTE KEGADRIENL QELINAAESF VTQEGFGRDA
VALPLDEHGG AAPPKPPMPG IVDADTGETL SPLAAFLTHA ALEAGDNQAQ AGQNAVQLMT
VHASKGLEFD GVFIGGMEEG LFPHENAASE RDTLEEERRL MYVAITRARR RLYLSHSQTR
MLHGQTRYNI RSRFFDELPE AALKWLTPKR QSFAALASHS GAGSAYSSSA RQSFGFKSAG
AESGVFAHLP VPPRKGAPAH GLAAGIAVFH TKFGEGKVLA LEGSGTDERA QVHFARHGSK
WLLLSVAKLT VVD
|
|---|
| |