Gene Veis_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0216 
Symbol 
ID4691160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp236508 
End bp237170 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID639848001 
Producthypothetical protein 
Protein accessionYP_995026 
Protein GI121607219 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGC CATTGGCGTT CATGCCAGCG TTGCCAGTGT CGCGTCACCG ATCAGATGTC 
GTAGGCTGCG CGCAGCCATC GGAGCGCAGC GCAAGGCGCA TCGCGCAGCC CATACCGAGC
GTATTGGCAA GCGATGCAAC GCCGCGATGC GCTTCGATGG CCAGCGCAGA CCGACAGATG
ATCGGTGACG CGACACTAGC CTGCGCCTGC GCGGCGCAAG CGCAAAGTTC CGTCACCGTG
TTCGGCGCGC TGGACGCCGC TCTGACCCAC TCCAAAGGCT CGGTCGCCAG CGGCACCACC
CTGTCCAACA ACAACTGGGC TGCGTCGAAG CTCGGGTTCC GTGGGGTCGA AGACCTCGGC
GGCGGGCTCG AGGCGGGCTT CTGGATCGAA GGCGCCATTC TTCCCGACAG CGGAGCAGGG
GACGCGACGA ACACCAACAA CCCGCCGGGT GGTCAAGGCA GCGTGGGGGG ACTCACCTTC
GGGCGCCGCT CCACGGTGAG CCTGTTCGGA CCCTGGGGCG AACTGCGGGC TGGCCGGGAC
CTGCAGCCGC ACTACCTCAA CATCGGCCTG TTCGACCCCT TCGCGCATAT CGGCATCGGC
CAGGCCCGGT TGCCGACATC CACGGTCGCA GGCGTCGCCA TCGGCATCGA GCACACTTTC
TGA
 
Protein sequence
MHQPLAFMPA LPVSRHRSDV VGCAQPSERS ARRIAQPIPS VLASDATPRC ASMASADRQM 
IGDATLACAC AAQAQSSVTV FGALDAALTH SKGSVASGTT LSNNNWAASK LGFRGVEDLG
GGLEAGFWIE GAILPDSGAG DATNTNNPPG GQGSVGGLTF GRRSTVSLFG PWGELRAGRD
LQPHYLNIGL FDPFAHIGIG QARLPTSTVA GVAIGIEHTF