| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6360 |
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| Symbol | |
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| ID | 7975682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1109147 |
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| End bp | 1110355 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796927 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_002948186 |
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| Protein GI | 239821001 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.70732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTCT CCCGCATTGC CGCCCGCGTG CGGCGCATCA AGCCCTCGCC CAGCACCTCG
GCCGCCGACC GCGCCAACGA GCTGCGCCGC CAGGGCAAGT CGATCGTGAA CCTCGTGGTG
GGCGAGCCCG ACTTCGACAC GCCGCCCCAC ATCCGGCAGG CCGCCGCCGC CGCCATCGAA
AAAGGCGCAA CGCGCTACAC CCTGATGGCC GGCACCGTGG AGCTGCGCCA GGCCATTGCC
GCCAAGCTGG AACGCGAGAA CGGCCTGCGC TACGCGATGA ACGAGATCAT CGCCACCAGC
GGTGCCAAGA GCGCGATCTA CAACGCGCTT GCGGTCACGC TGGAGCCGGG CGACGAGGTG
ATCATTCCCG CGCCCTACTG GGTGTCGTAC CCCGACATGG TGCTGGCCTG CGACGGCACG
CCGGTCACGG TGGCCTGCCC CGAAGCCAAC GGCTTCAAGC TGACGCCCGC GCAGCTGGAG
GCCGCCATCA CGCCGCGCAC GCGCTGGCTG CTGATCAACT CGCCCAGCAA CCCGACCGGC
GCCAGCTACA CCGCGGGCGA ATACCGCGCG CTGGCCGAGG TGCTGCAGCG CCACCGCCAA
GTGATGGTGA TGACCGACGA CATCTACGAG CACATCCGCT TCGACGGCCA AGCGACGCCG
CACCTGCTCG CAGTGGCACC CGCGCTGCGC GACCGCACGC TGGTGGTCAA CGGCGTCTCC
AAGACCTATG CGATGACCGG CTGGCGCATC GGCTACGCGG CCGGGCCGGC CGACCTGGTC
CAGGCGATGG ACACGCTGCT GTCGCAGTCC ACCGGCAACT GCTGCTCGGT GAGCCAGGCG
GCCGCCGCGG CGGCGCTCCA CGGCAACCAG GACTTCGTGG CCGAGAGCGT GGCCGTCTAC
AAGCAGCGCC GCGACCGCAC CCTGGCACTC ATCAACGGCA TTCCCGGCCT GCACTGCAGC
CCGCCGCCCG GCGCCTTCTA CCTGTACATC CACTGCGGCG GCCTGATCGG CAAGACCACG
CCAGAGGGCA AGCGGCTGGA CCAGGACGGC GACGTGGTGA TGTACCTGCT CGAGAGCGAA
GGCGTGGCCG TGGTCGCGGG CACCGCCTAC GGCCTGTCGC CCTACTTCCG CCTTTCCATT
GCCACGTCGA TCGAGACGCT GGAGGAAGGC TGCACGCGCA TCGCGCGAGC CGTGGCCGCC
CTGCGCTGA
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| Protein sequence | MTLSRIAARV RRIKPSPSTS AADRANELRR QGKSIVNLVV GEPDFDTPPH IRQAAAAAIE
KGATRYTLMA GTVELRQAIA AKLERENGLR YAMNEIIATS GAKSAIYNAL AVTLEPGDEV
IIPAPYWVSY PDMVLACDGT PVTVACPEAN GFKLTPAQLE AAITPRTRWL LINSPSNPTG
ASYTAGEYRA LAEVLQRHRQ VMVMTDDIYE HIRFDGQATP HLLAVAPALR DRTLVVNGVS
KTYAMTGWRI GYAAGPADLV QAMDTLLSQS TGNCCSVSQA AAAAALHGNQ DFVAESVAVY
KQRRDRTLAL INGIPGLHCS PPPGAFYLYI HCGGLIGKTT PEGKRLDQDG DVVMYLLESE
GVAVVAGTAY GLSPYFRLSI ATSIETLEEG CTRIARAVAA LR
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