Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6165 |
Symbol | |
ID | 7975055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 893373 |
End bp | 893747 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644796735 |
Product | hypothetical protein |
Protein accession | YP_002947994 |
Protein GI | 239820809 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTGC CTGCCATTCG TCGCAATAAT GTCCTGATCC TCTTCGGCGA CTTCGTTGCG GAGCGTGCGT CCAATGGGGC GGAACCGCTC GGCCTGGCGG CGAAGTTCGC GGAGAAGCTG CAGATCTCCG CGAGCATGTG GAGCCAGATC AAGAAGGGCC GCGTCATTTC CGACAAGCTC GCACGGCAGA TCGAGAGCCG TTGTGGCAAG GAGCCACTTT GGCTCGATGC GCCTCAAAGC GCGGAGCCGT TGCAGGACCC GGGGGAGGAG CGCTTCGTCG AGCTGGCCCG CCGAGCCTAT AGAGCTCAGA ACGCGCGCGG CAAGCGTGCG CTGAGGACCA TCTTGCTGGA GCATGGGGCG CCTCAGAAGG AGTGA
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Protein sequence | MSLPAIRRNN VLILFGDFVA ERASNGAEPL GLAAKFAEKL QISASMWSQI KKGRVISDKL ARQIESRCGK EPLWLDAPQS AEPLQDPGEE RFVELARRAY RAQNARGKRA LRTILLEHGA PQKE
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