3 homologs were found in PanDaTox collection
for query gene Vapar_6165 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_6165  hypothetical protein  100 
 
 
124 aa  249  7e-66  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008826  Mpe_B0291  hypothetical protein  43.75 
 
 
162 aa  85.9  2e-16  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.000155268  normal  0.0378737 
 
 
-
 
NC_012791  Vapar_1513  hypothetical protein  44 
 
 
60 aa  40  0.01  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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