Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6125 |
Symbol | |
ID | 7975571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 846934 |
End bp | 847260 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796681 |
Product | Antibiotic biosynthesis monooxygenase |
Protein accession | YP_002947955 |
Protein GI | 239820770 |
COG category | [S] Function unknown |
COG ID | [COG1359] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.440027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAGCA GCCAAACCGG CACCCAACCC GTCACTGTCG TGATCACCTG CACCATCCAG CCCGACAAGC TGGAGCTGGC CCGGCGGGAG CTGCGGGCAG TGATCCGGCA GGTGATGGCG CTCGAGCCGG CCTGCCTCGG CATCCGCGTG CATGAGGACG CCAGGGCCCC GAACCGCTGG CTGATCGTGG AACAGTGGGC CAGCGAAGCG GCCTTTACCG GCCCGCACAT GCAGCAGCCG CACATGCAAG CCTTCATGCA GACGGCGCAG ACCTTCCTGG ACGGCCAGGC CGATTTCGGC TTCTGGCACG AAACCCTGGC AACCTGA
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Protein sequence | MHSSQTGTQP VTVVITCTIQ PDKLELARRE LRAVIRQVMA LEPACLGIRV HEDARAPNRW LIVEQWASEA AFTGPHMQQP HMQAFMQTAQ TFLDGQADFG FWHETLAT
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