| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6051 |
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| Symbol | |
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| ID | 7975336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 773237 |
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| End bp | 774025 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796610 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947884 |
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| Protein GI | 239820699 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.152569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTG CCGCAACCGT CACCATCGAA GGGGTGTCCA AGTCTTACGA GGTGCGCGCC
GGCGACGACG TGCTCGCACT CGACCGTGTC GACCTCGACA TCACCCCCGG AAGTTTCGTG
GCCATCGTCG GCCCGAGCGG CTGCGGCAAG AGCACGTTGC TGTCGCTGCT GGCCGGCCTG
ACACCGGTGT CCTCGGGCCG CCTGAGCATC GACGGAGACC AGGTGTTGAA GCCTCATCCC
AAGGCCGGCG TGGTGTTCCA GTCCGACCTG CTCCTGTATT GGCGCAGCAT CCTGGACAAC
ATCCTTCTGC CCATCGAGAT CAAAGGCCTC GACCGCAAGG CGTACGCCGA TCGCGCGCGC
GACCTGCTGG TTCAGGTCGG CCTCAAGGGC TTCGCCGACA AGTTTCCATC CGAGCTGTCG
GGCGGCATGC GCCAGCGCGT GGCGATCTGT CGCGCGCTCA TCCAGGAACC AGGCCTCCTG
CTGATGGACG AACCCTTCGG CGCACTCGAT GCACTGACGC GCGAGCAGAT GATCATGGAC
CTGCAGACCA TGTGGATGAG GCTCGGCAAC ACGGTACTCT TCATCACGCA CGGTATCGAC
GAGGCCGTGT TCCTGGCCGA CCGCGTGATC GTGATGTCGC CGCGGCCCGG TCGCGTCGAC
CTCGATCTCA CGATCGACAT TTCGCGGCCG CGGCGTTGGA GCGGCATTCA TGAGAACCCG
GGGTTCCAGC AATTCGTGCG CCAGGTGCGC GAGGTGTTCG AGGCCCAAGG CGTTCTCGTC
GCCCATTGA
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| Protein sequence | MSSAATVTIE GVSKSYEVRA GDDVLALDRV DLDITPGSFV AIVGPSGCGK STLLSLLAGL
TPVSSGRLSI DGDQVLKPHP KAGVVFQSDL LLYWRSILDN ILLPIEIKGL DRKAYADRAR
DLLVQVGLKG FADKFPSELS GGMRQRVAIC RALIQEPGLL LMDEPFGALD ALTREQMIMD
LQTMWMRLGN TVLFITHGID EAVFLADRVI VMSPRPGRVD LDLTIDISRP RRWSGIHENP
GFQQFVRQVR EVFEAQGVLV AH
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