Gene Vapar_5937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5937 
Symbol 
ID7974976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp639013 
End bp639339 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID644796501 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002947775 
Protein GI239820590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.496478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCCA CCGGCGTCAA GCAGAAGGTG ATCCGCGCTG CCGACCCAGT TGCATCGCCC 
CCGATCTTGG TGCGCGGGCA GGGCGGCCTT GGGCAGTACG TGCGTCAAGC CAGAAAGCGG
CAACAACTTC GCATCGACGA CGCGGCGAGC CTCTTTGGCG TCTCTGTCGA CCTGGTCTCG
CGACTTGAGA ATGGAGCGGG CTCCGTCCGG CTGGACAAGC TGCAGGCGGT ACTCGACGGG
CTTGGTCTTG GGCTTGTGGT CGGCCCCAAA AGTGACCTGC AGAGTTTTGT AGACAGGCAG
AAGGCGTCGG ACGATGAGCG GGTCTGA
 
Protein sequence
MNSTGVKQKV IRAADPVASP PILVRGQGGL GQYVRQARKR QQLRIDDAAS LFGVSVDLVS 
RLENGAGSVR LDKLQAVLDG LGLGLVVGPK SDLQSFVDRQ KASDDERV