| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5780 |
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| Symbol | |
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| ID | 7974901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 484522 |
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| End bp | 485607 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796361 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947635 |
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| Protein GI | 239820450 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2021] Homoserine acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCA TTCCGCACTT CAACCGCTTC GCCTTGCGAG CCGCCTTGTA CTCCTGCCTC
GCGATGCTCG CCCTGTCGAG CCGGGCCGCC GACTACCCGG CGCCGAAGGA GGGCAGCTGG
ATCGCCAAGG ACTTTCGCTT TCACACCGGC CAGGTCATGC CGGAACTGCG CCTGAACTAC
GTCACCATTG GCGCGCCCAG CGGCGAGCCG GTGCTGGTCC TGCATGGAAC CGCCGGCTCG
GCGGCAAGCA TGCTGACGCC CGCATTTGCC GGCGAGCTGT TCGGCGTGGG CCAGCCGCTG
GATGCCACCC GCTACTACAT CATCATTCCC GATGGCCTGG GAACCGGCAA GTCGGCCCGC
CCCTCGGATG GCCTGCGCGC CAACTTTCCC CGCTACAACT ACGACGACAT GGTGGATGCA
CAGTACCGGC TCGTCACCGA ACACCTTGGC GTCAAGCACC TCCGGGCGAT CATCGGCAAT
TCGATGGGGG GCATGCATGC CTGGATGTGG GGCGTGAAGC ACCCTGACGC CATGGACGCG
CTGGTGCCGA TGGCGTGCCA GCCCACCGAG ATGTCCAGCC GCAACTGGAT GATGCGCCGG
CTGCTGACCG AGTCCATCCG CAGGGATCCG GAGTGGAACA ACGGCAACTA CACCACCCAG
CCTCGCAGCG CCCAGTTGGC CTCCGTGTTC TTCGCCACCG CCACCAGCGG CGGCAACCTG
GCGATGTACA AGGCCGCGCC GACGCGTGCC CAGGCCGACA AGCTGCTGGA GACGCGCCTG
GGTGCGCCCT TCACTGCGGA TGCAAACGAC ATCCTCTACC AATGGGAGGC GTCCGCCGAC
TACAACCCGT CCCCCGGGCT GGAGCGCATC CAGGCGGCCG TGCTTGCCAT CAACGCGGCC
GATGATGAGC GCAACCCGCC TGAGACCGGC ATCATGGAAC GCGAAATGAA GCGCGTGAAG
AATGGCCGCT ACTACCTGAT CCCGTCCAGC GACCGGACCA CCGGCCACGG AACCACGGGC
CAGGCAACAT GGTGGAAGGC GCAGCTTGCG GAGCTGCTGC AAAAGGCGCC AAGGCAAGGG
CTGTAG
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| Protein sequence | MPAIPHFNRF ALRAALYSCL AMLALSSRAA DYPAPKEGSW IAKDFRFHTG QVMPELRLNY
VTIGAPSGEP VLVLHGTAGS AASMLTPAFA GELFGVGQPL DATRYYIIIP DGLGTGKSAR
PSDGLRANFP RYNYDDMVDA QYRLVTEHLG VKHLRAIIGN SMGGMHAWMW GVKHPDAMDA
LVPMACQPTE MSSRNWMMRR LLTESIRRDP EWNNGNYTTQ PRSAQLASVF FATATSGGNL
AMYKAAPTRA QADKLLETRL GAPFTADAND ILYQWEASAD YNPSPGLERI QAAVLAINAA
DDERNPPETG IMEREMKRVK NGRYYLIPSS DRTTGHGTTG QATWWKAQLA ELLQKAPRQG
L
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