| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5761 |
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| Symbol | |
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| ID | 7974882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 466700 |
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| End bp | 467881 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644796342 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002947616 |
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| Protein GI | 239820431 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.878418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT CCCCCGAACC CATCGCCGGC GCAGCCAAAG GCGCGCCGCT CGCCGGCGTG
CGCGTGCTCG ACCTGACCCG CCTGCTGCCC GGTCCGCTCG GTGCCATGCA CCTGGCCGAC
CTCGGCGCCG ACGTGATCAA GATCGAAGAC ACCGGCGCCG GCGATTACGC GAGCCCCAGC
GTGCGTGCGC TCGTCAACCG CAACAAGCGC GCGATCCGCA TCGACCTGAA GCACGCGCAG
GGCGTGGCCA CGCTGCTGCG CCTGTGCCGC GAGGCCGACG TGCTGGTGGA GGGCTTCCGG
CCCGGCGTGA TGCAGCGGCT GGGCGTCGGC TATGAAGCGG TGGCGGCCGC GAACCCGCGC
ATCGTCTACT GCAGCATCAG CGGCTTCGGC CAGACCGGGC CGCTCAGCGA CACGCCCGGG
CACGACCTGA ACTACGCGGC GCTTGCCGGC GTGGCCGACC AGGTCGGCAA TGCCGCGGGA
CCGGCCCTGT CGAACCTGCC CGTGGCCGAT CTGCTGGGTG GCACCATGAC CGCGGTGGCC
GGGATCCTGG CCGCGCTGTT CGATGCCGCG CGCAGCGGAC GCGGGCGGCA TGTCGACATC
GCGATGGCCG ACGGCGTGCT GGCCCATGCG GTGCTGCCGC TGGCCGGCCT GCACCAGCAC
GGCAGCGTGC CGCGCATCGG CCACAGCGCG CTGACGGGCG CGCTCGCCTG CTACGGCTAC
TACCGCACGG CCGACGGCCG GCAGCTGGCG GTGGGTGCGC TGGAGCCCAA GTTCTGGCAC
GACCTGTGCC GCCTGCTCGA GCGCCCCGAC CTCGCACCGC TGCACCGCAG CGGCGATGCC
GCCACCGAGG AGCGCCTGCG CGCGGAGCTG GCCGCGATCT TCGGCGCGCG GCCGCTCGCG
CACTGGCGCG GCCTGTTCCA CGACGGCACG GGCTGCGTGA CGCCGGTGCT GCGCATCGAC
GAGACGCTGG CGCATCCGCA TTTCCGCGCG CGCGGCATGC GCGTTGCGAC CGATGACGCC
GCGCCGCCGC AGCTCGGCTG CCCGATCAAG ATGACCGGCT TCGAGCCGTC TGTTCCCCGC
GCCGCCCCGC GCGCCGGCGA GCACACCGAC GAGATCCTGC GGCAGGCCGG GCTCGATGCA
TCGGCCGTGG CCGCGCTGCG GGCCGCCGGC GCCATCGATT GA
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| Protein sequence | MTSSPEPIAG AAKGAPLAGV RVLDLTRLLP GPLGAMHLAD LGADVIKIED TGAGDYASPS
VRALVNRNKR AIRIDLKHAQ GVATLLRLCR EADVLVEGFR PGVMQRLGVG YEAVAAANPR
IVYCSISGFG QTGPLSDTPG HDLNYAALAG VADQVGNAAG PALSNLPVAD LLGGTMTAVA
GILAALFDAA RSGRGRHVDI AMADGVLAHA VLPLAGLHQH GSVPRIGHSA LTGALACYGY
YRTADGRQLA VGALEPKFWH DLCRLLERPD LAPLHRSGDA ATEERLRAEL AAIFGARPLA
HWRGLFHDGT GCVTPVLRID ETLAHPHFRA RGMRVATDDA APPQLGCPIK MTGFEPSVPR
AAPRAGEHTD EILRQAGLDA SAVAALRAAG AID
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