| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5704 |
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| Symbol | |
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| ID | 7975757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 419120 |
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| End bp | 419884 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796286 |
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| Product | GntR domain protein |
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| Protein accession | YP_002947560 |
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| Protein GI | 239820375 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACC ATAAAACCAA AACGCCGAAG AAACCCGCCG CCCCGGAGAC GCCTGCCCGG
CGCGGTCCGC TGGCCGTGAC GGAGGCGCTC GCGCGGCGCG TGATCGGCGG CGAATGGGAT
GACGAATCGA CACTGCCGAC CGAGGTCGAA CTGGCCGAGC AACTGGGCGT GGCCCGCACC
TCCGTGCGCG AGGCGCTCAC GCGGCTGAAG GCCAAGGGCC TGCTCGCGTC GCGCCAGAAG
GCCGGCACGC GGGTGCTGCC GCGCATGCAA TGGAACATGC TCGACGAGGA CGTGCTGCGC
TGGACCTGGT CGGGCCACGA CCGCGCGCAG ATGGCGCAGC ACCTGATGCA GCTGCGGCGC
ATCGTCGAGC CGGCCGCCTG CGAGATTGCG GCCGCTTCGG CGCCCGACGC GGCCATTGCC
GCGATCGAGC GCGCCTACCG CCTGATGGAT GCCGCCGGCA TGGACCCGGT GGCCTATGCC
GGGCCGGACC TGAGCTTTCA CCAGGCGATC CTCAGCGCCA CCGGCAATCC GTTCCTGGTG
GCCTTCGGCG CCACCATCGA GGCGGCGCTG CGCATGTCCT TCGAGCTGTC GACGCGCCAG
CCGGGCGCGC CACGCAAGAG CCTGCCGATG CACCGCGCGG TGCTCGACCA GATCTGGGCC
CGCAAGCCGG CCGCGGCGCG CAAGGCCATG GAAGAGCTGC TCGGCCTCAC CGAATCGAAC
ATCCAGCGCG GGGTCGCCAG GTCGGGCGCC ACGCCGCCGG CCTGA
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| Protein sequence | MSDHKTKTPK KPAAPETPAR RGPLAVTEAL ARRVIGGEWD DESTLPTEVE LAEQLGVART
SVREALTRLK AKGLLASRQK AGTRVLPRMQ WNMLDEDVLR WTWSGHDRAQ MAQHLMQLRR
IVEPAACEIA AASAPDAAIA AIERAYRLMD AAGMDPVAYA GPDLSFHQAI LSATGNPFLV
AFGATIEAAL RMSFELSTRQ PGAPRKSLPM HRAVLDQIWA RKPAAARKAM EELLGLTESN
IQRGVARSGA TPPA
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