| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5643 |
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| Symbol | |
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| ID | 7975255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 349832 |
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| End bp | 350581 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644796227 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002947501 |
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| Protein GI | 239820316 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA AGATATTCGT GGCGGGTGCG GCCGGGGCCA TCGGCAGCGC ACTCGTGCCC
CTGTTGGTCG ACGCGGGCTA CACTGTGTAC GGCAGCACGC GGCGCACCGA GCGCGCGCAG
GCGCTGGAGG CAAGCGGTGC GGTGCCGGTC GTTGTCGACG TGTTCGACGC GAAGGCGCTG
CGCGCGGCGC TGATGCGCAT CGCACCGGCG ATCGTGATCC ACCAGCTCAC CGACCTGCCG
CGGGATCTCG ATCCCAGGCG GATGGCCGAT GCCGCCCATC GCAATGCGCG CGTGCGCACC
GAGGGCACGC GCAACCTCGT GGCCGCCGCG GTGGCGGCCG GCAGCCGCCG GCTGGTGGCG
CAGAGCATCG CCTGGGTCTA TGCGCCCGGC GCCACCCCGC ATGTCGAGGA AGACCCGCTC
GATCTCGCGG CCGAAGGCAC GCGCGGCGTC AGCGTGGGCG GCGTGGCGGC GCTGGAGCGC
AGCGTGCTGG GCACGGCGGG CCTCACGGGC ACGGTGCTGC GCTACGGGCA GTTCTACGGT
CCCGGCACGT CGACCGCCGA GCCCAGGGGC GCGTGTCCGG TCCACGTGGA GGCCGCGGCC
TGGGCAGCGG TGCTGGCGCT GCGGCATGCA CGCGGCGGTG TCTTCAACAT CGCCGAGGAC
AACCCCGAAG CCAGCAGCGA GAAGGCCAGG CGCGAGCTGG GCTGGAGTGC ATCGCTGCGG
CTGCGCCAGC GGCAGGGAGT GGCCTCGTGA
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| Protein sequence | MSEKIFVAGA AGAIGSALVP LLVDAGYTVY GSTRRTERAQ ALEASGAVPV VVDVFDAKAL
RAALMRIAPA IVIHQLTDLP RDLDPRRMAD AAHRNARVRT EGTRNLVAAA VAAGSRRLVA
QSIAWVYAPG ATPHVEEDPL DLAAEGTRGV SVGGVAALER SVLGTAGLTG TVLRYGQFYG
PGTSTAEPRG ACPVHVEAAA WAAVLALRHA RGGVFNIAED NPEASSEKAR RELGWSASLR
LRQRQGVAS
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