| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5590 |
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| Symbol | |
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| ID | 7975202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 298534 |
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| End bp | 299367 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796174 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002947448 |
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| Protein GI | 239820263 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.332068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAA AACGAGCGAT CCTTCGCACC CTCCTCGCGC TGACGAGCGC ATGCACCCTC
ACCCTCAGCG TCGCCCAGGA GCCGGAAAGC TCGATGACCC GCGTCCAACG GACCAAGGTC
CTGCGGGTGG GCGCGATCGC CGGGGCCATT CCGTACTTCA GCAAGGACCT GGTCTCGGGC
AAGTGGGAAG GCTTCGGGCC CGACTTCTCC GAGAGCCTGG CGAAGAAGTT CGGCGCCAAG
GTCGAGTATG TGGAAACCAC CTGGGGCAAC GCGGTGCTCG ACCTGCAGTC GAACAAGATC
GATGCGATGT TCGGCATGGC GCCGACGCCG GCGCGCAAGG AGGTCGTGAA CTTCTCCGAC
ACCCTGTTCG ACAACACCTA CACCGCCGTG TGCAAGAAGG GGTTCCCGAC CAAGACCTGG
GAGCAGCTGA ACGCGCCGGA GAACAAGATC GTGGTCGACG TGGGCTCCAG CCACGACCAG
CTCGCCACGC GCATCCTGCC GAAGGCCGAC GTCCAGCGGC TGGAGAACTC GGGCTCCGCA
ACGCTCGCGC TGCAGGCCGG CCGCGCCGAC TGCCAGATCC TGGTGATCCT GCTGGCGCAG
CCGCTGCTGG CCAAGCGCGC CAACGTGGGC GTGATGCAGA TCCCCACGCC GATCTACACC
GCACCCGTGA GCATCGGCCT GCGCAAGGAA GCCGATCCGG CCATGCAGAC AGCCGTCAAC
GCCTGGCTGG GAGAGGTTCG CGCCAAGGGC GAGGTCCGCA GCGTGATCCT GAAGAACATG
GAAAAACTCG CCGGCGTTCC CGCCAGCGCC TTCCCGTCCG AAATCAAGTT CTGA
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| Protein sequence | MTTKRAILRT LLALTSACTL TLSVAQEPES SMTRVQRTKV LRVGAIAGAI PYFSKDLVSG
KWEGFGPDFS ESLAKKFGAK VEYVETTWGN AVLDLQSNKI DAMFGMAPTP ARKEVVNFSD
TLFDNTYTAV CKKGFPTKTW EQLNAPENKI VVDVGSSHDQ LATRILPKAD VQRLENSGSA
TLALQAGRAD CQILVILLAQ PLLAKRANVG VMQIPTPIYT APVSIGLRKE ADPAMQTAVN
AWLGEVRAKG EVRSVILKNM EKLAGVPASA FPSEIKF
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