| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5502 |
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| Symbol | |
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| ID | 7975359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 205165 |
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| End bp | 206256 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796089 |
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| Product | Luciferase-like monooxygenase |
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| Protein accession | YP_002947363 |
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| Protein GI | 239820178 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.86603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCG GAATCTTCAT TCTGATGCAG CAGCGGAACA AGCACAAAAC CTCCCACCAG
ATCCTGCGCG ACGCCGTCGA GCAGACTCGC CTGGCGGACG AACTGGGTTT TGGTGCCGCA
TGGTACGCCG AGCACCACTT CAGCAACTAC GGCATGTGCT CCTCGCCGCT GACCATGATC
GCGCACTGCG CGGCGGTCAC CCGCAACATC CGGCTGGGCA CCGGCATCGT GGTCGCGCCG
CTGTACACGC CGGCGCGCCT GATCGCCGAC GTGGCGATGG TCGACCAGCT GTCCGACGGC
CGGCTGAACC TGGGCATCGG CTCGGGCTAC CAGCACTTCG AATTCGAGCG CTTCGGCGTG
TCGCTGGAAT CCGCCAAGGG CCGCACCTTC GAGATGCTCG ACATGCTCGA GGCTGGCCTC
ACGCAGCCCA AGTTCAGCTA CGAGGGCGAG TACTACCGCC AGCCCATGAG CGCCATCAGC
CAGCGCGCGG TGCAGCGCCC CACGCCGCCG ATGTGGATCA CCAGCGTCGA CCCGGCCTTC
CTGTCGCGCG CCGTGAAGTC CGGCCACCAT GTGTTCGTCT CGGGCGGCGA CGGCGGCCTG
GAGAAGCTGG CCGCCACCCG CGCGCTGATC GACCAGGTGG CCGCGGCCGA GGGCAAGGAC
CCGGCCGGCG TGCAGGTCGG CCTGCTGCGC GCGGCCTATG CCAGCAACGA CAAGGACGAG
GTGGAGCGCT ACCTGGAGTG CGCGCGCTAC CAGCGCCGCA TCGCCGTGAG CCTGAAGCGC
CGCACCGCGC AGATCGCCGA CGACTACCAG GTCGAGGAAG GCATTGTCGA GGGCGAGCCG
AGCCTGGACG AGATGCGCGC GCTGCTGCCC GTGGGCAGCG TCGACACCGT GATCGAGCGC
GTGGTCAACG AGATCCGCAC GCTCAAGCCG GTGCACTACT GCTTCCAGAC GCAGATGGGC
GACTTCGACC ACAAGACGAT GCTGCGCCAG CTCGAGACCT GGGGCAAGGT CATCATCCCG
GCGGTGCAGC AGGAGATCGC CAACGATCCG CCGCACCGTC CCGCGGCGCG GCCCGAACTT
GCCGCGGCCT GA
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| Protein sequence | MDFGIFILMQ QRNKHKTSHQ ILRDAVEQTR LADELGFGAA WYAEHHFSNY GMCSSPLTMI
AHCAAVTRNI RLGTGIVVAP LYTPARLIAD VAMVDQLSDG RLNLGIGSGY QHFEFERFGV
SLESAKGRTF EMLDMLEAGL TQPKFSYEGE YYRQPMSAIS QRAVQRPTPP MWITSVDPAF
LSRAVKSGHH VFVSGGDGGL EKLAATRALI DQVAAAEGKD PAGVQVGLLR AAYASNDKDE
VERYLECARY QRRIAVSLKR RTAQIADDYQ VEEGIVEGEP SLDEMRALLP VGSVDTVIER
VVNEIRTLKP VHYCFQTQMG DFDHKTMLRQ LETWGKVIIP AVQQEIANDP PHRPAARPEL
AAA
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