| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5426 |
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| Symbol | |
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| ID | 7975120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 131847 |
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| End bp | 133037 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796014 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947288 |
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| Protein GI | 239820103 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2807] Cyanate permease |
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| TIGRFAM ID | [TIGR00896] cyanate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCCT CACAAACGGC AGATTCCTCG CCCCGCGCCG CGCTCCTCAT CGCCGGCATC
CTGCTCATCG CAGCCAGCCT CAGGGCACCG ATCACCACGC TCGGGCCCCT GCTCGAACCC
GTGCGCGAAA GCTTTGCGCT CAACGCCTCG CAAGCCGGCC TGCTGACCAC CCTGCCGCTC
CTCGCGTTCG CCCTGGTGTC GCCGCTGGCG GCGCCACTGG CGCACCGGTT CGGCCTGGAG
CGCGTGCTCT TCGCGTCGCT GGCGCTGCTG GTCGCCGGCA TCGGCGTGCG CTCGGCCGGA
ACGGTGTCGG CACTTTTCGC GGGCACCTGC GTGATCGGCG GGGCGATCGC CGTCGCCAAC
GTGCTGCTGC CCAGCTTGCT CAAAAGGGAC TTTCCTCGCC ATGTGGCGAA GCTCACGGCC
TGCTATGCAC TGTCGATGAT CGCCGCCGCC GGCATCGCAT CGGCCGTGGC CGTGCCGCTG
GACCATGCGC TGGGTGCCGG GTGGCCCGCC TCGCTGGGCA CGGTGGCCGT GCTGCCGCTC
GTCGCTGCGT TGCTGTGGTT GCCGCAACTG CGCTTTCGCA CCGTTTCGGC ACCCGGCCTT
GCCACGGGTG CGCGGGGGCC GTCGGTGTGG AAGGCCTCGC TGGCCTGGCA GGTGGCGGGC
TACCTGGGCC TCACCTGCTT CATCTACTTC GCGGCGATTG CCTGGCTGCC TTCGATCCTC
CAGGAGGCCG GCTTCTCGAG CGCGCGCGCC GGCACGCTGC ATGGGTGGAT GCAGCTGGCG
GGGGCCGTGC CTGCGCTGCT GCTGATGCCG CTGCTGCACC GCATGCCCGA CCAGCGCTGG
ATCGCCTTCG CGTCGCCCGC ACTCAGTGCC TGTGGCCTGG CGGGCCTGCT GGCCCTGCCC
GCATTGACGC CGCTGTGGAT CTTCGCCTTC GGCATGGGCA TGGGATCGGC GCTGATCCTG
AGCCTGGCCT TCGTCGGACT GCGAGCGGGC AGCCAGCAGC TCGCCGCGTC GCTCTCGAGC
ATGTCGCAAT GCATCGGCTA CCTGCTGGCG GCGGTCGGCC CGACCTTGGT CGGCTTCCTG
CACGAAGCCG CGGGCAACTG GACGATGCCG CTGGCCGCCT GCCTGGTGCT GTGCCTGGCG
ATGTGCGTGC TGGGGCTGTC GGTGGGCCGG TCCGTGCACA TCGGCCAGTG A
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| Protein sequence | MHSSQTADSS PRAALLIAGI LLIAASLRAP ITTLGPLLEP VRESFALNAS QAGLLTTLPL
LAFALVSPLA APLAHRFGLE RVLFASLALL VAGIGVRSAG TVSALFAGTC VIGGAIAVAN
VLLPSLLKRD FPRHVAKLTA CYALSMIAAA GIASAVAVPL DHALGAGWPA SLGTVAVLPL
VAALLWLPQL RFRTVSAPGL ATGARGPSVW KASLAWQVAG YLGLTCFIYF AAIAWLPSIL
QEAGFSSARA GTLHGWMQLA GAVPALLLMP LLHRMPDQRW IAFASPALSA CGLAGLLALP
ALTPLWIFAF GMGMGSALIL SLAFVGLRAG SQQLAASLSS MSQCIGYLLA AVGPTLVGFL
HEAAGNWTMP LAACLVLCLA MCVLGLSVGR SVHIGQ
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