Gene Vapar_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5413 
Symbol 
ID7975107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp119077 
End bp119700 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID644796001 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002947275 
Protein GI239820090 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTC TCTATGACAG CCGCCTGTCG GGCAACTCGT GGAAGATCCG CATCCTGCTG 
AGCCAGCTGG GCCTGGCGTA CGACCGCGTC ACGCTCGACC TGCAGAAAGG CGAGACGCGC 
GAATCCGCGT TTCGCCAGAT CAGCCGTTTC TCACGCGTGC CGGTGCTCGT GCTCGACGAT 
GGGCGCCCCA TCGTCGAATC GGGCGCGATC CTGCTGCATC TTGCCCAAGG CACGCCCTAC 
CTTCCCGACG ATCCGTATCC GCGAGCGGAA GTCACGGGCT GGCTCTTCTT CGAGCAGGCC 
GACCTCCAGA AGGCCATTGC CGTCCCGCGC GTGCTCCACT TGCACGGCCT TGCGCATGAA 
AGGCAGCAGG ACATCGAGCG GCTCCAGGCC GAGGGGTACG CAGGCCTCGA AAAGCTGGAG 
CAGTGGCTGC TCGGCCATGC ATGGCTCGTC GGCGATCACT ACACCGTGGC CGACCTCGCA 
CTCTCGGCCT ACGTTTCGCT GGCCGGCCAG GGCGGCTACG ACATGGCGCG CTTTGCCGGC 
ATCCGCGAGT GGCTGGTGCG CGTGCACGGC CAGCGCGGCT GGGTGCCGCT GATTCCCGAA 
GACGGCCAGG CCGCCCGCCG CTGA
 
Protein sequence
MLRLYDSRLS GNSWKIRILL SQLGLAYDRV TLDLQKGETR ESAFRQISRF SRVPVLVLDD 
GRPIVESGAI LLHLAQGTPY LPDDPYPRAE VTGWLFFEQA DLQKAIAVPR VLHLHGLAHE 
RQQDIERLQA EGYAGLEKLE QWLLGHAWLV GDHYTVADLA LSAYVSLAGQ GGYDMARFAG 
IREWLVRVHG QRGWVPLIPE DGQAARR