Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5272 |
Symbol | |
ID | 7972705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5595251 |
End bp | 5595730 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644795866 |
Product | Barstar (barnase inhibitor) |
Protein accession | YP_002947140 |
Protein GI | 239818230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATG ACAACGACTT GAGCGGCGCC CCGAAGCGCC CCGAAGAAAT GATGATGACT ATGGAAAGAC CAGCGGAGAT GACTTTATCC CTTCGTGCCG TACGCCCGAA CATCGTGCAG TCGATTCGTG CGTTCCGCGT GAACGACCTG CAGGAAGCCG CCAACGCCGC GGGCCAGCAC TTCCTGTACG CCAATCTGGG GAACGCCCAG ACCAAGCAGG ACGTTCTGGA CCTGATCGCC CAGCAGTTCA CCTTTCCGGC GCATTTCGGC AAGAATTTCG ACGCGCTGTA CGACTGCATG ACCGACCCGT TGCATAAATC GGGCCCGCAG CCCGGCTTCG TGATCGTGCT CGAGCAGATC CCGGCCAACG CCAAGTTCGA CAAGGAAGCG CGCGAGCAGC TGCTCGACAT CTTCCGCGAT GCCTCCGATT ACTGGGGAGA CCGGAAAGTC CCGTTCCGCT GCTTCTATTC TTTTCTGTAG
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Protein sequence | MSDDNDLSGA PKRPEEMMMT MERPAEMTLS LRAVRPNIVQ SIRAFRVNDL QEAANAAGQH FLYANLGNAQ TKQDVLDLIA QQFTFPAHFG KNFDALYDCM TDPLHKSGPQ PGFVIVLEQI PANAKFDKEA REQLLDIFRD ASDYWGDRKV PFRCFYSFL
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