| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4941 |
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| Symbol | |
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| ID | 7974223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5249221 |
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| End bp | 5250051 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795536 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002946811 |
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| Protein GI | 239817901 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGAA CGAAGACGGC GCCGCCCGAA AGCGGCGGCG CGCAGCGCGG GGAGCGCCTG
ATGTGGCTCA CGCACCAGCG CGTGTTCTAC GCCGGGCTGC TCGGGGCCGC GGCCGAGCGC
ACGATGGGCG GGCACGGCGT GTACGTGTCG CCCGCGGGCG CGCCGCCCAA CCGCCTGTGC
ATCGGCGGCG GCGCCTGGCA GACGGGCGAG CTGCTGGTGG TGCCGCCGCA GGTGCCGCAC
CGCGTGGAAA GCGCGCATCC GCTCATCTTC AACCTGCTGA TCGAATCGGA GTCGGTCGAT
CCCGCGCGCA TGCCGGCCTT CATGCAGCAC TGCGGCCCGG TCGATGCGCC GGCCTTCGTG
CGGCGCATGC GCGATGCCCA TGCGCACCTG CTCGCCGCGT CGGGCCGCGG AACCAACTTC
GACGGCTTCG ACTTCGATGC CCTGTTCTTC GGCGAGCCGC TGGCGCCGCG CGCGCTCGAT
GCGCGCATCC GCAAGGTGAT CGACGCCATC AACGCCGACC CGGCCGCACC CGCCTCGGCC
GAAGACTGCG CGGCCTCGGT GCATCTTTCC TTCTCGCGCT TCCTGCATCT GTTCAAGCAG
GAAACCGGCA TGGCGTTCCG CGCCTTCCGT GCCTGGAAGC GCGCGCGCAG CCTGCTGCGC
TACGTGCGCC AGGCCGGCAC GCTGACCGAC ATCGCGCTGG ACACCGGCTA CCCCGATTCA
ACGCACTTCA GCCATTCGAT CCGCCAGGTC TACGGCCTGA AGCCCAGCGA CATCCTGGCG
GGTTCCCGCC GCCTTGCACT GCACGACGCG GCCGGCGGCT TCAGGCAGTA G
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| Protein sequence | MQRTKTAPPE SGGAQRGERL MWLTHQRVFY AGLLGAAAER TMGGHGVYVS PAGAPPNRLC
IGGGAWQTGE LLVVPPQVPH RVESAHPLIF NLLIESESVD PARMPAFMQH CGPVDAPAFV
RRMRDAHAHL LAASGRGTNF DGFDFDALFF GEPLAPRALD ARIRKVIDAI NADPAAPASA
EDCAASVHLS FSRFLHLFKQ ETGMAFRAFR AWKRARSLLR YVRQAGTLTD IALDTGYPDS
THFSHSIRQV YGLKPSDILA GSRRLALHDA AGGFRQ
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