| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4669 |
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| Symbol | |
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| ID | 7972880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4958690 |
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| End bp | 4959688 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795254 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_002946540 |
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| Protein GI | 239817630 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCCG CGCTCGATAA TTCGATCGCG GATGCGGACC TTTGCCGCAT TCTTGCCGAC
TTTTATCGCC AACGCCTTTC CTGCATGACT TTCACGCCCA AGACGCTGCT TCGTGTTTCC
GTGGTGGTTG CGCTCGTCAC CATCCTGCTC AAGGGCCTGG CGGGCTACGT GACCAACTCG
ATGGGCCTGA TCTCCGATGC GATGGAGTCC TTCGTCAACC TTGCCAGCGC GATGTTCGCA
CTGGGCATGG TGACCATCGC CTCGCGGCCG GCCGATGAAG ACCATCCCTA CGGCCACCAC
AAGGCCGAAT ATTTCTCTTC GGGCTTCGAG GGCATCCTGA TCGTCGGCGC GGCGGCCGCC
ATCCTCTGGG TCTCGGTGCA GCGGCTGCTT GCGCCGCAGC CGCTCGAGCA GCTGGGCTGG
GGGCTCGGGC TCTCGGTGGT CAGCTCGGGC TTCAACGCGG CCCTGGCTTT TGCGCTGTTC
CGCGCCGCGC GGACGCACCG CTCGATTGCG CTCGAAGCCG ATGCGCGGCA CCTGATGACC
GACGTGTGGA CCTCGGCCGG GGTGGTGATC GGCATCGTGG CCGTGCACTT CAGCGGCTGG
CTCTGGCTCG ACCCGGTGCT GGCCATTGGC GTGGCGCTCA ACATCGTGCG CGAAGGCGTC
AGGCTGGTGT GGCGCTCGTC GCAGGGGCTG ATGGACGAGG CGCTCGACGC CGAGACCATT
GCCACGCTGC GCGCCACGCT CGACCAGTTT GCCGCACGCA TGCCCGAAGG CACGCGCATG
CGCTTCGACG ACATGGTGAC GCGGCGCGCG GGCCAGCGCC GCTTTGCCGA CCTGCACATG
CACGTGCCCG GCGAGTGGAC GCTGCAGCAT GCCGCCGCGA TGCGCGACGA GCTGGAGCAG
GCATTGATGG ACGCCGTGCC GGGCCTGCGC GTGACCATTC AGCTGCTGCC GCTGGGCATG
GAAGCGCGCG GGCCGCGCAT CGAGGAGGAA GCCGCATGA
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| Protein sequence | MEAALDNSIA DADLCRILAD FYRQRLSCMT FTPKTLLRVS VVVALVTILL KGLAGYVTNS
MGLISDAMES FVNLASAMFA LGMVTIASRP ADEDHPYGHH KAEYFSSGFE GILIVGAAAA
ILWVSVQRLL APQPLEQLGW GLGLSVVSSG FNAALAFALF RAARTHRSIA LEADARHLMT
DVWTSAGVVI GIVAVHFSGW LWLDPVLAIG VALNIVREGV RLVWRSSQGL MDEALDAETI
ATLRATLDQF AARMPEGTRM RFDDMVTRRA GQRRFADLHM HVPGEWTLQH AAAMRDELEQ
ALMDAVPGLR VTIQLLPLGM EARGPRIEEE AA
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