Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4515 |
Symbol | |
ID | 7972804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4765229 |
End bp | 4765984 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644795104 |
Product | hypothetical protein |
Protein accession | YP_002946391 |
Protein GI | 239817481 |
COG category | [S] Function unknown |
COG ID | [COG2253] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGCCA TCTTCGAGGA CAAGTTCTTG ACGGGCCAAG TCGCAATGCG CGGAGGCACG GTGCTTCACA AGGCGCACCT CGCACCGGCG AGCAGGTATT CGGAAGACAT CGACTTGGTG CTGGTGGGCG ACCGTCCGCC CGGCCACATC AAGAAGGCAC TCACACGAGT ACTTAAGCCG CTTCTTGGTA ATCCGGTCGA GTCGGTGATG ACGGACATTC AGTTGACTGT TCGCAACCTG GTGGCCAAGT CAAAAATCAT CCGCAGCACA TACACCTACG ACCCCACGAG TTCTGACGCG GCGCTCGCCC ACCTCAAAGT CGAGGTCAAC ACCAACGAGA ACAAGAGCTT CTTCCCTCTC GTGACCGTCA AAGTCCAGGT TCCCGGGCCC GGCGCGGCAC GGCACATTGC CGTGGCGTCA TACGACCTCG ACGAGATGCT CGGCACAAAG CTGCGCGCGC TGCTCCAGCG CGAACACGGT CGAGACCTGT TCGACATCGT CTGGGCGTGG GAGACATCGC AACAGCCCCA TGCGGTCTCC AAGGTGAACC CGGGTCGAGT CGGCGAAGCC TTCCGCTTCT ATATGAGGCA GGAGGGCAGC ACGTTCAGCG CTGCCAACAT CGAAGCAGAG CTGGTGCGCC GAATGAAGTC GCGCAAGTTC TTGAGCGACA TGGACGGCTA CTTGGCACAT GACAGGACAT ATTCGCCACA GACCGCGTAT GAGCAGTTCT GCCAGGTGTT CTTGCCGCAC CTCTGA
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Protein sequence | MAAIFEDKFL TGQVAMRGGT VLHKAHLAPA SRYSEDIDLV LVGDRPPGHI KKALTRVLKP LLGNPVESVM TDIQLTVRNL VAKSKIIRST YTYDPTSSDA ALAHLKVEVN TNENKSFFPL VTVKVQVPGP GAARHIAVAS YDLDEMLGTK LRALLQREHG RDLFDIVWAW ETSQQPHAVS KVNPGRVGEA FRFYMRQEGS TFSAANIEAE LVRRMKSRKF LSDMDGYLAH DRTYSPQTAY EQFCQVFLPH L
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