| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4486 |
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| Symbol | |
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| ID | 7972774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4734786 |
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| End bp | 4736057 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795075 |
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| Product | formyl-coenzyme A transferase |
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| Protein accession | YP_002946363 |
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| Protein GI | 239817453 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | [TIGR03253] formyl-CoA transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA AACCCCTCAA CGGCATCAAG ATCATCGACT TCACGCACGT GCAAGCCGGT
CCGGCCTGTA CCCAGATGCT GGCCTGGTTC GGCGCCGACG TGATCAAGGT CGAGCGCCCG
GGCGCCGGCG ACGTCACCCG CAGCCAGCTG CGCGACATCC CGAACGTCGA CGCGCTGTAC
TTCACCATGC TCAACAGCAA CAAGCGCTCG ATCACGCTGG ACACGAAGAA GCCCGAGGGC
AAGGCCGTGC TGGAAAAGCT GATCCGCGAA TCCGACGTGC TGGTGGAGAA CTTCGGCCCC
GGCGCGCTCG ACCGCATGGG CTTCACCTGG GCGCGCATCC AGGAGCTGAA CCCCAAGATG
ATCGTCGCCT CGGTCAAGGG CTTCAGCGAC GGCCACCACT ACGAGGACCT GAAGGTCTAC
GAGAACGTGG CGCAGTGCGC CGGCGGCGCC GCCTCCACCA CCGGCTGGTG GAAGGGCGAG
AACTCGGTGC CGACGATCTC GGCCGCCGCG CTGGGCGACT CCAACACCGG CATGCACCTG
GCCATCGGCA TCCTGACGGC CATCATCGGC CGCCAGCAGA CCGGCAAGGG CCAGAAGGTG
GCCTGCTCGA TGCAGGACGC CGTGCTCAAC CTGTGCCGCG TGAAGATGCG CGACCAGCAG
CGCCTGGACA ACGTGGGCTA CCTGGAGGAA TACCCGCAGT ACCCGCACGA GATGGACGCC
TTCAAGGACA AGGTGGTGCC GCGCGGCGGC AACGCCGGCG GCGGCGGCCA GCCGGGCTGG
ATCCTGAAGT GCAAGGGCTG GCAGACCGAC CCCAACGCCT ACATCTACTT CACGGTGCAG
GGCCACGCCT GGGACCCGAT CTGCGACGCG CTCGGCAAGC CCGAGTGGAA GACCGATCCC
GACTACATGA CCCCCAAGGC CCGCCAGCCG CACATCGACC AGATCTTCGC CACCATCGAG
GACTTCATCA AGGACAAGAC CAAGTTCGAG GCGGTGGACA TCTTCCGCAA GCACGACATT
CCCTGCGCCC CGGTGCTGTC GATGAAGGAA CTGCTGCACG ACGAGTCGCT GCGCAAGAGC
GGCTCCATCG TCGAAGTGCC GCACAAGGAG CGCGGCAGCT ACTGGACCAT CGGCAGCCCG
ATCAAGTTCT CGGACCTCAA GCCCGAGGTC ACCGCCTCGC CGCTCCTGGG CGAGCACACC
GAAGAGGTGC TGGCGGAGCT TGGCTACACC CAGGCACAGA TCGACAACCT GAAAGAATCG
AAGGCCGTCT AG
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| Protein sequence | MSNKPLNGIK IIDFTHVQAG PACTQMLAWF GADVIKVERP GAGDVTRSQL RDIPNVDALY
FTMLNSNKRS ITLDTKKPEG KAVLEKLIRE SDVLVENFGP GALDRMGFTW ARIQELNPKM
IVASVKGFSD GHHYEDLKVY ENVAQCAGGA ASTTGWWKGE NSVPTISAAA LGDSNTGMHL
AIGILTAIIG RQQTGKGQKV ACSMQDAVLN LCRVKMRDQQ RLDNVGYLEE YPQYPHEMDA
FKDKVVPRGG NAGGGGQPGW ILKCKGWQTD PNAYIYFTVQ GHAWDPICDA LGKPEWKTDP
DYMTPKARQP HIDQIFATIE DFIKDKTKFE AVDIFRKHDI PCAPVLSMKE LLHDESLRKS
GSIVEVPHKE RGSYWTIGSP IKFSDLKPEV TASPLLGEHT EEVLAELGYT QAQIDNLKES
KAV
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