Gene Vapar_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4067 
Symbol 
ID7974389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4310387 
End bp4310956 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID644794653 
Producthypothetical protein 
Protein accessionYP_002945946 
Protein GI239817036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGGC GCTACGATCG CCGCATGAAT CCTTCCATCG ATGTTGCCGT CGTGATGCGC 
CGCGAGCGCG TCGAGAGCCG TTGGCAGTCC TGGCGCTGGA TTCTCGAAAG CGTCGGCCCC 
GACCAGCCCG GCTTCGGCAC CGAGCCGCGC CTGCTCGAGG CGAACGAGAG CGCGCAGCGC 
TGGCTGCACC CCGGCTTCAA GACCGAGCTG TTCCGCGACG ACGTGGAGGG CTACCACCTG 
AATGCCACCA CGCCCGCGCC CTGCTGGTTC GTGCTGTGGC GCATGGAGGA AGAGTCCACC 
ATTGCCGACG AGCCGATCGC GCGGCCGGTG GTGGTGAGCC TCAGCTACAA CGAGGCCGGC 
CGCTGGCTCG ACGCGCAGGA AACGGTGGAG CAGGTGCCCG CGCCCGAGGA GGTGATCGAG 
TGGATGCGCG GCTTCGTGCA GGCGCATTAC GTGATCGAGC CCAAGCGCCG CAAGCGGCCC 
GAGAGTTTCC GCCCGCTGGT CGACCGCTTC GGCAATGCGG CCAGCGTGTC GACCGAGAAG 
AAGCGCGGAC GCGGAGCGGG CGATGTCTGA
 
Protein sequence
MRRRYDRRMN PSIDVAVVMR RERVESRWQS WRWILESVGP DQPGFGTEPR LLEANESAQR 
WLHPGFKTEL FRDDVEGYHL NATTPAPCWF VLWRMEEEST IADEPIARPV VVSLSYNEAG 
RWLDAQETVE QVPAPEEVIE WMRGFVQAHY VIEPKRRKRP ESFRPLVDRF GNAASVSTEK 
KRGRGAGDV