Gene Vapar_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3649 
Symbol 
ID7973882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3852698 
End bp3853186 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID644794234 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002945532 
Protein GI239816622 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.981115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACG CCAAGGCCGT CGCCGAAGTC CATGCCCTGG CCGCCAAGGC TGCCTACGAA 
GGCATCCTGC CCGAAGAAGA GCTGCGCGTG CTGGCGCCCG CCTCCCGCGA AGCCAAGTGG 
CGCGAGGCCA TCGAGTTCAG CGAGCCGCAG GTGCAGGTGG CGGTGCAGGA CGGCGAGATC 
GTCGGCTTCG TCGGCTTCGA CCGCTCGCGC GACCCCAAGA CGCCGTCCAC CACGGGCGAG 
ATCTGGGCCC TGTACGTCAA GCCCGAGCAT TGGGGCAAGG GCATCGGTGT CGCCCTGTGG 
GACGCCGCGC GCGAAGGCCT CGAGGAAGAG GGCTGCACCA CGGTCACGGC CTGGGTGCCC 
ATCCGCAACG ACCGCGCCAT GCGCTTCTTC GAGCTCGCCG GCTTCAAGCG CGAAATGAAG 
ACCGCCAAGA CCACCGCGCT GGGCACGGTG CGGGTCGAGG AAATCCGGCT CAAGCGCAGC 
GTTGCCTGA
 
Protein sequence
MRDAKAVAEV HALAAKAAYE GILPEEELRV LAPASREAKW REAIEFSEPQ VQVAVQDGEI 
VGFVGFDRSR DPKTPSTTGE IWALYVKPEH WGKGIGVALW DAAREGLEEE GCTTVTAWVP 
IRNDRAMRFF ELAGFKREMK TAKTTALGTV RVEEIRLKRS VA