| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3601 |
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| Symbol | |
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| ID | 7970676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3807144 |
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| End bp | 3808058 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794186 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002945484 |
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| Protein GI | 239816574 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0485295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGC TTCGTCTGCC GATTCCTTTC GGTGCTGCCG CTCTCGCGGT GGCCTTTGCC
GCCCTGTTGC CGCACGTGGC CGCGCAGGCC CAGGAGAACG ACACGCTCTC CAAGATCAAG
GCGAGCGGCG CCATCACCTT CGGCTACCGC GAGTCGTCGT TCGGCTTCTC GTACCTCGAC
GGCAACCTGA AGCCGGTGGG CTACAGCATC GAGATCTGCA ACCGCATCGT CGAGGCGGTG
AAGAGCGAAC TCAAGCTGCC GGCCATCGAG ATCAAGTACC AGGCCGTGAC CTCGGCCAAC
CGCATTCCGC TGGTGCAGAA CGGCACGGTG GACATCGAGT GCGGCTCCAC CACCAACCTG
GTCGAGCGCC AGAAGCAGGT GGCGTTCTCG CCCGACATCT TCCGCTACAA CGTGCGCATG
CTGGTGAAGG CCGATTCTGG CATCAGGAGC ATTGCCGACC TGCAGGGCAA GACGGTGGCC
ACCACCACGG GCACCACCTC GTTCCGACTG CTGCGCGAGG CCGACAAGGG CCGCAACCTC
GAGGTGAACA ACCTGGGCGG CAAGGACCAC AGCGACTCCT TCCTGCTGGT GGAGAGCGGC
CGTGCGCAGG CCTTCGTGCT CGACGACATC CTGCTGGCCG GCCAGATCGC GAATGCGCGC
AATCCGAAGG ACTTCATCAT CACGGGCGAG AGCCTGCGCA CCGAGAACCA GTCGCTGATG
TTCCGCAAGG ACGATCCGGC CTTCAAGGCG CTGGTGGACC GCGTGGTGTC GGGCATGATG
AAGTCGGGCG AGATGGAGAA GCTCTACAAC AAGTGGTTCA TGTCGCCGAT TCCGCCCAAG
GGCATCAACA TCAACTATCC GCTCAACGCC GAGACGAAGG AGGCCTTTGC CAACCCGTCG
TCCAAGGGCA TCTGA
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| Protein sequence | MPKLRLPIPF GAAALAVAFA ALLPHVAAQA QENDTLSKIK ASGAITFGYR ESSFGFSYLD
GNLKPVGYSI EICNRIVEAV KSELKLPAIE IKYQAVTSAN RIPLVQNGTV DIECGSTTNL
VERQKQVAFS PDIFRYNVRM LVKADSGIRS IADLQGKTVA TTTGTTSFRL LREADKGRNL
EVNNLGGKDH SDSFLLVESG RAQAFVLDDI LLAGQIANAR NPKDFIITGE SLRTENQSLM
FRKDDPAFKA LVDRVVSGMM KSGEMEKLYN KWFMSPIPPK GININYPLNA ETKEAFANPS
SKGI
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