| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3459 |
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| Symbol | |
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| ID | 7972570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3643162 |
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| End bp | 3644136 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794043 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945342 |
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| Protein GI | 239816432 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.505499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTC GTCAATGGGG CGCCATGGTG GGAGCCGCCG CGCTGGTCGC GGCCGCGGGC
CAGAGCTTCG CGCAGGGCTA TCCGAACAAG CCGGTCGAGC TGAGCGTGCC CTTTGCACCG
GGCGGCACGA CCGACATCGT GGCGCGCGTG ATTTCCGACC CGCTCGGCAA GGTGCTGGGC
CAGCCGGTGG TGGTGATCAA CCGCGCGGGT GGCGGCGGCA TCGTGGGCGC AGCCGAAACG
GCGCGCGCCA CGCCTGACGG CTACAAGCTC GGCGTTGCCA CGGTGTCGAG CACGGCGGCC
AACCCGGCCA TCAACCCCAA GGTGCCGTAC GACCCGATCA ACGACTTCAC GCCGATCATC
AACATTGCGG CCACGCCCAA CATCATTGCG GTCAACCCGA GCTTCCCGGC CAAGAACTAT
GCGGAGTTCG TCGCCGAGCT CAAGAAGAAC CCCGGCAAGT ACTCGTACGC CTCGTCGGGC
ACCGGCGGCA TCGGCCACCT GCTGATGGAG CTCTACAAGA GCCTCACCAA CACCTTCGTC
ACGCACATTC CCTACCGCGG CGCGGGCCCG GCGCTCAACG ACGTGGTGGC CGGCCAGGTG
CCGATCATGT TCGACAACAT CCCGTCGGCC ATGCCCTTCA TCCAGAGCGG CCGGCTGGTT
CCGATCGTGG TGTCGGCGCC GCAGCGTCTG GCCGCGCTGC CCAACGTGCC CACCTTCAAG
GAAGTGGGGC TCGAGCCGGT CAACCGCATG GCCTACTACG GCATCCTCGG CCCCAAGGGC
CTGCCCAAGG AAGTGGTCGA CAAGGTCAGC GCCGGCGTGA AGAAGGCGGT GGAAGACCCG
GCCGTGAAGA AGCGCATCGA GGACACCGGT TCGCTGATCG TCGCCAACAC GCCCGAGCAG
TTCGCCGCGC AGATCAAGGC CGAATACGAG GTCTACAAGC AGGTGGTGGT GAAGCAGAAG
CTCAAGCTCG ACTGA
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| Protein sequence | MQRRQWGAMV GAAALVAAAG QSFAQGYPNK PVELSVPFAP GGTTDIVARV ISDPLGKVLG
QPVVVINRAG GGGIVGAAET ARATPDGYKL GVATVSSTAA NPAINPKVPY DPINDFTPII
NIAATPNIIA VNPSFPAKNY AEFVAELKKN PGKYSYASSG TGGIGHLLME LYKSLTNTFV
THIPYRGAGP ALNDVVAGQV PIMFDNIPSA MPFIQSGRLV PIVVSAPQRL AALPNVPTFK
EVGLEPVNRM AYYGILGPKG LPKEVVDKVS AGVKKAVEDP AVKKRIEDTG SLIVANTPEQ
FAAQIKAEYE VYKQVVVKQK LKLD
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