Gene Vapar_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3364 
Symbol 
ID7970602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3541383 
End bp3541964 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content66% 
IMG OID644793948 
ProductArsR family transcriptional regulator 
Protein accessionYP_002945247 
Protein GI239816337 
COG category[K] Transcription 
COG ID[COG1510] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCG CCACCCTTCC CCCGCTCAGC CGCCAGTTCG TCGCCCACTT CGGCGAGATG 
GGCAGCAAGT GGGGCATCAA CCGCACCGTC GGCCAGATCT ATGCGCTGAT CTTCATTTCC 
GAGCATGCGC TCAATGCCGA CGAGATTGCC GAGCTGCTGG AGTTCTCGCG CTCCAACGTG 
AGCATGGGCC TGAAGGAACT GCAGGCGTGG CGGCTGGTGC ATCTGCGCCA TCAACCGGGC 
GACCGGCGCG AGTATTTCGA GGCGCCGGCG GATGTGTGGG AGATCTTTCG CGTGCTGGCC 
GAGGAGCGCC GCCGCCGCGA GATCGAGCCG ACGCTTTCGA TGCTGCGCAA CGCGCTGCTC 
GAATCGCCCG CAAGCGATGC CGAGCGCCAC GCGCAGGAGC GCATGCGCGA GATGCACGAC 
CTGATCGACC GGCTCATGAA GTGGTTCGAC GACGTCCAGC GGCTCGCGCC CGAAACCGCG 
ATGCAGCTGA TGGGCATGGG CGCCACCGTG ACCAAGGTGC TGAGCCTCAA GGACCGCATC 
ACCGGCAGCA CGCCCAAGAA GAAAAAGCCG GCCGCCGGCT GA
 
Protein sequence
MPTATLPPLS RQFVAHFGEM GSKWGINRTV GQIYALIFIS EHALNADEIA ELLEFSRSNV 
SMGLKELQAW RLVHLRHQPG DRREYFEAPA DVWEIFRVLA EERRRREIEP TLSMLRNALL 
ESPASDAERH AQERMREMHD LIDRLMKWFD DVQRLAPETA MQLMGMGATV TKVLSLKDRI 
TGSTPKKKKP AAG