| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3215 |
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| Symbol | |
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| ID | 7973448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3393569 |
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| End bp | 3395020 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793800 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002945099 |
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| Protein GI | 239816189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.994871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTG TCGTCCGCAC CGACGAGCGC ATCCTCAGCT CCGACATCTT CGACCGCGAC
AGCCGCGTCA AGCGGCCTGA CCACGGCACC TGGTCCGAGC CCGCCAAGGA CATTCCGGTC
TATCACCGCT GCGGCGTGCT GGTGGTGGGC GGCGGGCCGT CGGGCACCGC GGCCGCCGCA
GCCGCCGCGC GCGCCGGCGC CGACGTGGCG CTGCTCGAGC GCTACAACCA CCTGGGCGGG
CTTTCCACCG GCGGCCTCGT GATCTGGATC GACCGCATGA CCGACTGGGA AGGCCAGCTC
GTGATCCGCG GCTTTGCCGA AGAGCTGTTC GACCGCCTGC CGGCCGATGC CATTGCCGGC
CCCGCGCGCG AGGACTGGGG CTCGCAGGAC GCGGCCAAGG CCGCCCACTG GTCGCAGCGC
ACGGCCGCCT ACCACGGCGT GGTCACGTGG TCGCCCACCA TCGACCCGGA GCGCCTCAAG
CTGCTCTCGC AGGAGATCGT GCTGGAGCGC AAGGTCAAGC TCATCTACCA CTCGTGGGCC
GCGATTCCCA TCGTGCAGGA CGGCACAGTG AAGGGCGTGG TGTTCGAGAG CAAGGAAGGC
CGCATGGCGA TCATGGCCGA CGTGGTGGTC GACGCCACCG GCGACGGCGA CCTATTCGCG
CGCGCCGGCG CGGCTTTCGT GAACGACATC GAGGAGGCCG ACGTGCACCA CTGCATGAAC
ACCTCGTGGC TGTTCGGCGG CGTGGACATG AACCGCTGGA TCGAATTCAA GGCCGGCCAG
CCCGAGGCGT TCAGCGCCTT CATGGCGCGC GGGCGCGAAG TGTGCGGCCT GTTCGAGCGG
CCCTTCGTCT CGTGGCGCAA CGACGTGGCG CTGTTCATGG GGCCGCGGCA GTCGGGCTAT
TCCGCGCTCG ACGTGGACGA CCTCACGGCC GTCGAAGTGC GCTCGCACCG CGCCATGGCC
GCGCACCTGG ACTACTTCAA GGCGCATGCG CCGGGCTTCG AGGAGGCCTA CCTGATGCTG
AGCGCGCCGC AGATCGGCGT GCGCCATGCG CGGCGCCTCT CCGGCGTGGG CGCGGTGCTG
CGCAGCCAGT GGCCCGACGG CGTGGCGCTG GCCGACGAGG TGGGCGTGAC GCCCGCGGTG
TCGCCCAAGT TTCCGAACAT CTCCATTCCC TACGGTGCGC TGGTGCCGCA GCAGCTCGAC
GGCCTGCTGG CCTGCGGGCG CCACATCTCG TGCGACCGCA ACTCGCATGG CTTCATGCGC
GAGATTCCGC AGTGCTGGAT CACCGGCCAG GCCGCGGGCG TGGCGGCGGC GCTGGCGTCG
CGGGGCGGCA TCGAACCGCG CTTCGTCGAC GTGGGTGCGC TGCAGTCGGC GCTGCTCGCG
CAGGGCGTGT ACCTGCGCGC CGGCGCCGGG CAGGGCGCGC AGGCGCGGGC CGCGGCCGAA
GCCGGGATCT GA
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| Protein sequence | MKTVVRTDER ILSSDIFDRD SRVKRPDHGT WSEPAKDIPV YHRCGVLVVG GGPSGTAAAA
AAARAGADVA LLERYNHLGG LSTGGLVIWI DRMTDWEGQL VIRGFAEELF DRLPADAIAG
PAREDWGSQD AAKAAHWSQR TAAYHGVVTW SPTIDPERLK LLSQEIVLER KVKLIYHSWA
AIPIVQDGTV KGVVFESKEG RMAIMADVVV DATGDGDLFA RAGAAFVNDI EEADVHHCMN
TSWLFGGVDM NRWIEFKAGQ PEAFSAFMAR GREVCGLFER PFVSWRNDVA LFMGPRQSGY
SALDVDDLTA VEVRSHRAMA AHLDYFKAHA PGFEEAYLML SAPQIGVRHA RRLSGVGAVL
RSQWPDGVAL ADEVGVTPAV SPKFPNISIP YGALVPQQLD GLLACGRHIS CDRNSHGFMR
EIPQCWITGQ AAGVAAALAS RGGIEPRFVD VGALQSALLA QGVYLRAGAG QGAQARAAAE
AGI
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