| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3069 |
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| Symbol | |
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| ID | 7973789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3226628 |
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| End bp | 3227620 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793653 |
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| Product | protein of unknown function DUF201 |
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| Protein accession | YP_002944954 |
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| Protein GI | 239816044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1821] Predicted ATP-utilizing enzyme (ATP-grasp superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.346833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC GCGTTTTTAT TTACGAGTAT CTCAGCGGCG GCGGATGGAG CGACTACGGC
GACGACGCCG CAGCCGACGA GCTGCTGCCG CTGGGCCTGT CGATGCGCGA TGCCATGGTG
GCGGACCTGG TGCGCGCCGC CGATTGTTCG GTTTCCGCGG CGGTCTGCGA ACCGGGGAAC
ACCCTGCCTG CAGGAGCCGT GCCAGTGCGG CCCCACGCCA ACGAATCGGC CTTCGACTTC
GTCGCGCGGC AGAGTGCGCT GCACGACCTG GTGTGGCTGG TGGCGCCCGA GACGGACGGC
CTGCTCGCGC GCTTCCAGCG CACGGTGGGC GATGCGCGCT GGCTCGGCTG CAGTGCTGAA
GCCATCGAGC TCACGGCCGG CAAGAAGGCC ACGCTCGCGC ACCTGGCCGC CCACGGCGTG
CAGACGCCGC TGGCCTTTGT CGATGCGCCC GACATCGCGC GCTGGGTGGT CAAGCCCGAC
GATGGCGCCG GCGGCGTGGC CACCCATGTG CACGCCCGCC ACGCCGACGC GCTCGACGAC
CAGGCCACGC GCACGCAGGC CGGCGCCACC TTGACGCTCG AGCCCTGGAT CGAGGGCGAA
GCCCTGAGCC TCTCGCTGCT GTGCACGGAG CAGAATGCCG AAATGCTGAG CATCAACCGC
CAATGCATTT CGATCGATGC GCACGGCAGG CTGTCGTTCG ATGGCGTGAA CGTCGATGCG
GTGGGCCGCG GCGACCCGCG CCGGCATGAC CTGGCTGCAC TGGCCATGCA GGTGGCGCGC
GCCATCCCCG GGCTGCGCGG CTTTGCGGGC ATCGACCTGG TCTGGCATCC GCAGCATGGG
CCAGTCGTGA TCGAAGTCAA TCCGCGCGTC ACCTGCGCCT ATGTCGGGCT CTCGGCGGCG
CTGGGCCGCA ACCTCGCGGC GGAGCTGCTG GCGGACCGCC TGCACGGCGG CGGCACTCAT
CAAGAACGGG AACTTGCGCG TGCCGTCGCC TGA
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| Protein sequence | MTQRVFIYEY LSGGGWSDYG DDAAADELLP LGLSMRDAMV ADLVRAADCS VSAAVCEPGN
TLPAGAVPVR PHANESAFDF VARQSALHDL VWLVAPETDG LLARFQRTVG DARWLGCSAE
AIELTAGKKA TLAHLAAHGV QTPLAFVDAP DIARWVVKPD DGAGGVATHV HARHADALDD
QATRTQAGAT LTLEPWIEGE ALSLSLLCTE QNAEMLSINR QCISIDAHGR LSFDGVNVDA
VGRGDPRRHD LAALAMQVAR AIPGLRGFAG IDLVWHPQHG PVVIEVNPRV TCAYVGLSAA
LGRNLAAELL ADRLHGGGTH QERELARAVA
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