| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3067 |
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| Symbol | |
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| ID | 7973787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3224399 |
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| End bp | 3225631 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793651 |
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| Product | formylmethanofuran dehydrogenase, subunit B |
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| Protein accession | YP_002944952 |
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| Protein GI | 239816042 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1029] Formylmethanofuran dehydrogenase subunit B |
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| TIGRFAM ID | [TIGR03129] formylmethanofuran dehydrogenase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC CCGACACTGC CGCGCCGCCC GGCAATGCCC CCTGGACCTG CCCCTTTTGC
CCCCTGCTGT GCGACACCTT CGGCGTGGAG GTGGGCACGC CGCTCAAGCT CGTGGGCAGC
GACTGCCCGC GCGCGCGCAA GGCGCTCGCC AACTTCGATG CCGCAGCCGG CGCGGCGCAG
CCCCGGGCCG GCGGCCAGGA CTGCGACCTG GACACGGCGA TCGGCAAGGC CGCCTCGCTG
CTCGCGGCCA GCCGCCAGCC CCTGTTCGGC GGCCTCGGCA CCGATGTCGC GGGCGCCAGG
GCGCTCTATG CGTTGGCCTG CGAAACCGGC GCCATCTGCG ACCCGGCCCA GGGGCAGGCG
CTGATGCATG GCCTGCGCGC GCTGCAGGAC CGCGGCGGCT TCAGCACCAC CCTGGCGGAA
GCAAGGACGC GGGCCGACCT GGTCGTCTGC ATGACCGAGG AGCCGGCGGC GCACTATCCG
GAGTTCTTCC GCCGCATCGG CGTGGGGGAG CGGCAGGGCG TGGCCGTGGA AACGCTGCCG
CTGCACGGCG ATCTGTTCGA CACCGTGGCG CTGCTCGCGG CGCTCGTAGC GGGCCGTGTT
TCGAAAGACG ATGCCCGCGT GCCGGCCGGC CTGGCGGCGC TTTCGGCGCT TTCGGCGCGG
CTGCAGGCGG CGCGCTATGC GGTGCTGGTG TATGAATCGG GCCGGCTGCC GGCGCAGGGC
GCGCTGATCG TCGAGGCGAT CCAGCGCATC GTCGCCACGC TCAACCGAAG CACGCGCGCG
GCCTCGCTGC CGCTGGGCGG CGGCGACGGC GCCTCCACCG TGAACCAGGT GTTCGCCTGG
CTCTCGGGCC TGCCGCTGCG TTCGCGCGCC GGGCCGCTGG GCCTGGAGCA TGAGCCGCTG
TGCTTCGATG CCGGGCGCCT GCTGGCCGAT GGCGCAGCCG ACACGCTGCT GTGGGTGTCG
AGCTACGGCC CCGAGCCCGC GCCGCCCGCT GCAGGCGTGC CGCGCATCGT GCTCGGCCAT
CCGGCAATGC GCGCGGCTCA GGATGCGCAC GAGCTGGTGT TCATTCCCGT GTCCACATCC
GGCATCGGCT CCGCGGGCCA TCTGTTCCGC ACCGACGGTT CGGTGCTGCT GCCGCTGCGG
CCCGTGTACG AGGACGGGCT GCCGAGCGTG GCCGAGGTGG TCCGGCGCCT GACGCAGGCG
GTGCAGGCGC TGAAGAAGGG GCGCGTGCAA TGA
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| Protein sequence | MNQPDTAAPP GNAPWTCPFC PLLCDTFGVE VGTPLKLVGS DCPRARKALA NFDAAAGAAQ
PRAGGQDCDL DTAIGKAASL LAASRQPLFG GLGTDVAGAR ALYALACETG AICDPAQGQA
LMHGLRALQD RGGFSTTLAE ARTRADLVVC MTEEPAAHYP EFFRRIGVGE RQGVAVETLP
LHGDLFDTVA LLAALVAGRV SKDDARVPAG LAALSALSAR LQAARYAVLV YESGRLPAQG
ALIVEAIQRI VATLNRSTRA ASLPLGGGDG ASTVNQVFAW LSGLPLRSRA GPLGLEHEPL
CFDAGRLLAD GAADTLLWVS SYGPEPAPPA AGVPRIVLGH PAMRAAQDAH ELVFIPVSTS
GIGSAGHLFR TDGSVLLPLR PVYEDGLPSV AEVVRRLTQA VQALKKGRVQ
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