| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3055 |
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| Symbol | |
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| ID | 7973775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3212715 |
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| End bp | 3213479 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793639 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
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| Protein accession | YP_002944940 |
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| Protein GI | 239816030 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCG ACAGGATCCA AGATTCACCG CGCCCGGCCA CAGGCAGCGA GAAAGCCGGC
CCGGCATGGA GCCGCGAGGA ATTCGAAGCC AAGCTGCGCG AGCGCGGCCG CAGCTATCAC
ATCCACCATC CGTTCAACGT CATGCTCAAC AGCGGCCGGG CCACGCCCGA ACAGATCCGC
GGCTGGGTGG CGAACCGCTT CTACTACCAG ATCGCGATCC CCATCAAGGA CGCGGCCGTG
CTCTCGAACT GCCCCGACCA GCAGGTGCGC CGCGGCTGGG TGCAGCGCAT CCTCGACCAC
GATGGCTTCG AGCTCGGCGG CATCAAGGAC GAAGGCGGCG TCGAAGCCTG GCTGCGGCTG
GCCGAGGCCG TGGGGCTCAC GCGCGAAGAA GTGCGCGACC TGCGCCACGT GGTGCCCGCG
GTGCGCTTCG CGGTCGATGC CTACGTGAAC TTCGCGCGCC GCGCGCCCTG GCAGGAGGCC
GTGTGCTCCT CGCTCACCGA GCTGTTCGCG CCCGAGATCC ACAAGCAGCG CCTGGCCACC
TGGCCCGAGC ACTATGCGTG GATCGAGCCG GCGGGCCTCG GCTACTTCCG CAACCGCGTG
AGCCAGGCGC GGCGCGACGT GGAGCAGGGC CTGGCGATCA CGCTCGACCA TTTCGACACC
CGCGCGCTGC AGGAGCGCGC GCTCGAGGTG CTGCAGTTCA AGCTCGACAT CCTGTGGGCC
ATGAACGACG CGATGGCGAC GCGCTACGGC GTGAACGGCG CATGA
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| Protein sequence | MHADRIQDSP RPATGSEKAG PAWSREEFEA KLRERGRSYH IHHPFNVMLN SGRATPEQIR
GWVANRFYYQ IAIPIKDAAV LSNCPDQQVR RGWVQRILDH DGFELGGIKD EGGVEAWLRL
AEAVGLTREE VRDLRHVVPA VRFAVDAYVN FARRAPWQEA VCSSLTELFA PEIHKQRLAT
WPEHYAWIEP AGLGYFRNRV SQARRDVEQG LAITLDHFDT RALQERALEV LQFKLDILWA
MNDAMATRYG VNGA
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