| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2994 |
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| Symbol | |
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| ID | 7972270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3150069 |
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| End bp | 3151241 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793579 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002944880 |
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| Protein GI | 239815970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.99928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGTG TGGTGATCAT CGGCGGCGGT GCCATCGGCT CCGCCATCGC CTATTTTCTC
AACCGGGATC CGCAGGAGGA GCCGTTCGAC GTCACCGTGG TCGAGCGCGA TTTTTCTTAC
ACGCAGGCCT CGTCGGCCTT GTCGGCCAGT TCGATCCGGC AGCAGTTCTC GAGCGCCATC
AACATCGAGA TGTCGCTCTA CGGCATCGAC TTCTTCCGCC AGCTGGGCGA AAACCTGCGC
GTCGGCGACA ACGTGCCCGA CATCGGCCTG GTCGAGCCGG GCTACCTGTA CCTGACGCCG
CCGGAGGGCG TCGAGGTGCT GCGCGAGAAC CACGCGGTGC AGAAGGCGCA CGGCGTCGAT
GTGGTCCTGC TGGCGCCCGA CGCGCTGCAG GCGCGCTTTC CATGGATGTC GGCCGAGGGC
ATTGCGCTGG CCTCGCTGGG CCTTTCGGGC GAGGGCTGGT ACGACGGCTA CAGCCTGTTG
CAGGCCTTTC GCAAGAAAGC CATTTCGCAG GGGGCGCGCT ATGTGCAGTC GCAGGCCACG
GGATTGAAGC GCAGCGGCCG CGTGGTGGCG GGCGTGGAAC TGGACATCGG CAACGTGCTG
GAGGCCGACG TGGTGGTCAA TGCCGCCGGC GCCTGGGCCG CGAGGGTGGC GGGCTGGGCC
GGCATCGATC TGCCGGTGCG CGCGCGCCGC CGCATGGTGT TCAGCTTTTC GTGCCCCGAG
ACCCTGCCGG GCTGCCCGCT GGTGATCGAC ACCTCGGGCA TCTGGCTGCG CCCCGAAGGC
CGGCGCTTCA TCTGCGGCTT TGCGCCGCCC CAGGACCGCG ACCGCGACGA CGCACCGCTC
GAAGTCGACT ACCGCGTCTT CGACGATTTC ATCTGGCCCG CATTGGCGCG CCGCGTGCCC
GCCTTCGAGG CCATCCGCAT GACCGGCGCG TGGGCCGGCT ACTACGAGAT GAACCTGTTC
GACCACAACG CGATCCTGGG CCTGCATCCG GACTGCGACA ACCTGTTCTT TGCCAACGGC
TTTTCCGGGC ACGGGCTCCA GCAGTGCCCG GCGGCGGGGC GCGGCGTGGC GGAACTCATC
CGTTATGGCA AATACCGCAG CCTCGACCTG TCGCCGGTGT CGTTCGCGCG GATTCTGGAG
AACCGGCCGC TCGTCGAGAA GAACGTGATC TAG
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| Protein sequence | MRRVVIIGGG AIGSAIAYFL NRDPQEEPFD VTVVERDFSY TQASSALSAS SIRQQFSSAI
NIEMSLYGID FFRQLGENLR VGDNVPDIGL VEPGYLYLTP PEGVEVLREN HAVQKAHGVD
VVLLAPDALQ ARFPWMSAEG IALASLGLSG EGWYDGYSLL QAFRKKAISQ GARYVQSQAT
GLKRSGRVVA GVELDIGNVL EADVVVNAAG AWAARVAGWA GIDLPVRARR RMVFSFSCPE
TLPGCPLVID TSGIWLRPEG RRFICGFAPP QDRDRDDAPL EVDYRVFDDF IWPALARRVP
AFEAIRMTGA WAGYYEMNLF DHNAILGLHP DCDNLFFANG FSGHGLQQCP AAGRGVAELI
RYGKYRSLDL SPVSFARILE NRPLVEKNVI
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